| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1524 |
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| Symbol | |
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| ID | 8332863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1727831 |
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| End bp | 1729633 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954670 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_003112286 |
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| Protein GI | 256390722 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0174562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00583447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCCC TGCTCGCCTT CCCCGACACC CCGAACCCCG ACCTGACGAA CCCTGACCTG
ACCTCGAATC CTGATCTGCC GGCGAACCTG GAACCGACAG TGACCCCCGG CCTCACCACG
ACCCCAGACC TGTCGGCCAC CGTCAGACTG CCCCGCCACC CCGAAGCCGA GCCGGAGCCT
TCCTCGATCG CCGACGCCGC CCCACCACCG CAACCGCAAG TGCAAACGCA AGCTCCAGAA
CTCTCGCTCC TCGCCCCCGA CTCGCTCTTC TACGCGAGTC CCAGCGCCCC ATCCCAGAAC
GACTCAGCGC CCTCAGATAT CCCGAAGCCC TCGCTCCTCG CCCCGACTTC CCTCTTCTAC
GCACCAGCCG ACCGCACCCC GCCGTCGTCC CCTGACACCC CCACCGGCGA GCCGCTCCTC
TCGCCGACCT CGCTCTACTA CGCGTCCGCC GACCGCCCGC TGCCCCCGGC ACAGCCGAAC
CCTGAGCCGG CCGCCACCGC ACCGCCTACC GCCGAACCGC CCACCGCCGA ACCCCCGACC
CCACCCGCGT CACCCACCGG CGGACCGCCA CCTCACCCAC CCACATCTCG CCGTGTGCCC
GAACCTGTCC TCGTCACGTC CGAACCCCAC GACCCCACCG CCGCCGACCG CCGCGCACGC
CTCGTGCTCC ATCACGCCTC CGAACCCGGC GACGCGCTGC TCTGCCGCCT CGTCGCACGC
TTCGGCGCCC CGACCGTCGC CACCGCGCTC CTGTCCGGAA GCGCCGCCGA CCTCCTGTCG
GCCCACGACG AGGAGTCGGC CGCGGACCGC GCGGCCCTCA TCAGCCGCGC CCACACGCTC
CAGACCCGCT GCTACCGCGC CGATCCCGAC GCTGATCTGG CGGTCAGCGA GAAGACCGGC
GCCCGCTACG TCATCCCTGC CGACGACGCG TGGCCGACCG CGCTCGACGA CCTCGGCGAC
GCCGCCCCGC TCGGCATGTG GTTTCTGGGC ACCGCCGATC TGGTCGCGGC ATCCAGACGC
GGGGTCTCCA TCGTCGGCGC ACGGATCGCC ACCGGCTACG GCATGCACGT CGCGGGCGAA
CTCGCCGCGG GCCTGGCCGA ACGCGGCTGG GCGATCATCT CCGGAGCCGC GCGGGGCATC
GACGGCGCGG CGCACCGTGG AGCGCTGGCG GCCCGGGGCG TCACCGTCGC GGCGCTCGCC
TGCGGCATCG ACCTCGTCTA CCCCGCAGGT CACGAGGCAC TGATCGGTGC CATCGCCTCC
GAAGGCCTCG TGCTCTCCGA ACTTCCGCCG GGTACGGCCG TCAGTCGCTT CCGATTTCTG
GATCGCAACC GTGTCATCGC CGCGCTCGGG CTCGGAACCG TCGTCGTCGA AGCTGCGGCC
CGCAGCGGCT CGCTCGTCAC CGCGCGCCTC GCCGACAGCC TGGGGCGTCC CGTGCTCGCG
GTCCCGGGAC CTGTCACGTC TGAGGCCTCC GAAGGCACCC ACCAGCTGAT CCGCGACGGC
GCGCTCCTGG TCACGCGCGC CGCCGAAGTG GTCGAACACC TCGGCGACCT CGGCGCAGAC
CTGGCTGAGC CCACCACCAC CGCCCGCACC AGCTCCCGCC GTCCCCGCGA CTCCCTCGAC
CCGATCGCGG CGCGCGTCCT CGACGCCCTC CCGATCGCCG GCCGAGGCAC GCTCGACACG
GTCGAAGCCG CCCTGGCCGC CGGTCTCGAA CCCCGCGCCG TGCACGCAGC CCTCGGCCGC
CTCACCACAG CCGGCTGGGT GGATCGCGAC GAGCGGGGGT GGTGTGCTCG CCTGCTTCCT
TGA
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| Protein sequence | MTSLLAFPDT PNPDLTNPDL TSNPDLPANL EPTVTPGLTT TPDLSATVRL PRHPEAEPEP
SSIADAAPPP QPQVQTQAPE LSLLAPDSLF YASPSAPSQN DSAPSDIPKP SLLAPTSLFY
APADRTPPSS PDTPTGEPLL SPTSLYYASA DRPLPPAQPN PEPAATAPPT AEPPTAEPPT
PPASPTGGPP PHPPTSRRVP EPVLVTSEPH DPTAADRRAR LVLHHASEPG DALLCRLVAR
FGAPTVATAL LSGSAADLLS AHDEESAADR AALISRAHTL QTRCYRADPD ADLAVSEKTG
ARYVIPADDA WPTALDDLGD AAPLGMWFLG TADLVAASRR GVSIVGARIA TGYGMHVAGE
LAAGLAERGW AIISGAARGI DGAAHRGALA ARGVTVAALA CGIDLVYPAG HEALIGAIAS
EGLVLSELPP GTAVSRFRFL DRNRVIAALG LGTVVVEAAA RSGSLVTARL ADSLGRPVLA
VPGPVTSEAS EGTHQLIRDG ALLVTRAAEV VEHLGDLGAD LAEPTTTART SSRRPRDSLD
PIAARVLDAL PIAGRGTLDT VEAALAAGLE PRAVHAALGR LTTAGWVDRD ERGWCARLLP
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