Gene Caci_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1485 
Symbol 
ID8332824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1689191 
End bp1689700 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content71% 
IMG OID644954633 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003112249 
Protein GI256390685 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTC CTGAACCGGC GCCCGCGACG AGGGCGATCG ACGGCCTCGA CGCCCGGCTG 
CTGGCGCTGC TGACCGAGGA GCCGCGCATC GGCATCCTGG AGGCGTCGCG GCGGCTCGGC
GTGGCGCGCG GGACCGTGCA GGCGCGCCTG GACCGGCTCC AGGCGCGCGG CGTCGTGCGC
GGCTTCGGTC CGCTGATCGA TCCGGCGGCG CTGGGCTACA CGGTCACCGC GTTCGCGACG
CTGGAGATCC GGCAGGGCCG CGGCGCCCAG GTTCGCGAAC ATCTGGCGGC GATCCCGGAG
CTGTTGGAGA TGCACACGAT CACCGGCGCC GGCGACATGT TGTGCCGGAT CGTCGCCCGC
TCGAACGCGG ACATGCAGCG CGTCATCGAC AAACTCGTGT CGTTCGAGGG CATCCAGCGC
ACTTCGACCG TGATCGCGAT GGCGAATCCG GTCCCGTTCC GGGTGCTCCC GCTCACCGAG
GTCTGCGCCA CCGAGCACTC TGAAGGGTAA
 
Protein sequence
MSSPEPAPAT RAIDGLDARL LALLTEEPRI GILEASRRLG VARGTVQARL DRLQARGVVR 
GFGPLIDPAA LGYTVTAFAT LEIRQGRGAQ VREHLAAIPE LLEMHTITGA GDMLCRIVAR
SNADMQRVID KLVSFEGIQR TSTVIAMANP VPFRVLPLTE VCATEHSEG