Gene Caci_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1446 
Symbol 
ID8332785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1648224 
End bp1649186 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content73% 
IMG OID644954594 
Productbeta-lactamase related protein 
Protein accessionYP_003112210 
Protein GI256390646 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGAAG CCGCTTCGCC GTCCAACGCT CCGCTGGGAG ACGGCTCCAC TGTGCAAATC 
GCTATGGGGC AAACCACTGC CGGACACGCT GTTGCCGGAC CCGCTGTCAC CCGGCGTGCT
TCGGCGCGCA TCACCGCCGC CTTCGCCGAC GCCGGCGTCA CCGGACAGCT GCACGCCCTC
GACATCGACA CCGGAGCCTC GGTCTCGGTC GCCGCCACCC AGCTCGCCGC GACCAGCAGC
CTGCACAAGG TCTGCCTGCT GGCGGCCTTC TACCGCGAAG CCGCCGCGGG CCGGCTCGAC
CGTACGCGCC AGATCGACAT CACCGCCGCC GAGCGCACCC CGGGGCTGTC CGGCATCGCC
GTGATGCGCG ACGCCGTCCG GCTCTCGCTG CGCGACCTCG CGACGCTCGT CGTCGCCGTC
AGCGACAACG CCGCCGCCGA CATCCTGTGG CGCGAGGTCG GCTTCGCCAC CGTCAACCGC
ACCATGGCCG AGCTGGGACT CTCCGACACG GTCGCCGTCC ACTCGATGGC CGACATCCGG
GACGCACTCC GGGCGCACCC GAACCTCGCC GATCCCGCAG CGCTCGCCGA TGTCAGCGTC
CTGAGTCCGA CGCAGACCAA CCGTTCCACG CCGCGCCAGA TGGCCGAGCT GTTCGCCGCC
GTGTGGCGCG ACGAGGTCTG CACCGGCGAT CTCGGCGAGG AACTGCGCGC GGTGCTCGGC
GGGCAGGCCT GGACGCACCG CATGTCCTCA GGCTTCCCAT TCGACGACGT CCGGGTCAGC
GGCAAGACCG CCACTCTGCC GACCCTGCGC CACGAGGCCG GCGTCGTGGA GTATCCCGAC
GGCGGCCGCT ACGCCGTCGC CGTCTTCACC CGCGCCGCCT CGACCGCCGC GGTCCTGCCG
GCCGCCGACG CCGTCATCGG GACCGCGGCC CGCCTCGCCG TGGACGCGCT GCGCTCGCTG
TAG
 
Protein sequence
MREAASPSNA PLGDGSTVQI AMGQTTAGHA VAGPAVTRRA SARITAAFAD AGVTGQLHAL 
DIDTGASVSV AATQLAATSS LHKVCLLAAF YREAAAGRLD RTRQIDITAA ERTPGLSGIA
VMRDAVRLSL RDLATLVVAV SDNAAADILW REVGFATVNR TMAELGLSDT VAVHSMADIR
DALRAHPNLA DPAALADVSV LSPTQTNRST PRQMAELFAA VWRDEVCTGD LGEELRAVLG
GQAWTHRMSS GFPFDDVRVS GKTATLPTLR HEAGVVEYPD GGRYAVAVFT RAASTAAVLP
AADAVIGTAA RLAVDALRSL