| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1393 |
|---|
| Symbol | |
|---|
| ID | 8332731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1583426 |
|---|
| End bp | 1584310 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954541 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_003112157 |
|---|
| Protein GI | 256390593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACTGG TTTGGGGCTT GGTGGCGGCG GTCGGCTGCG CGCTCGCCTA CGGCGCGGCG
ACGGTGTTCC AGGCGATCGG CGCCGGCCGC ACCAAGGACA CCGCCGGCGC CGGGGTGGAC
CCGCGCGTGC TGATCAGGGC CCTGTCCCAG CTGCCGTTCC TGGCCGGCGT GGGCCTGGAC
ACCGTGGGAC TGGTCGCGGA CCTGATCGCG CTGGAGAAGC TGCCGCTGTT CGCGGTGCAG
GCGATCATGA ACTGCTCGCT GGCGGTGACC GCGCTGCTGG CGGTGCCGCT GCTGAAGGCC
AAGCTGAGCC GCAACGACTG GATCGCGGTC GCCGCGGTGG TGCTGGGTCT GATCCTGGTC
GGGATCTCCG CCGGCGCCGA GCCGCCGGTG CACGTCGGGC GCGGGGTCCA CTGGGCCGTG
CTGATCGCGG TCGTGGTGCT GATCGCCGGG TCCTTCTTCG CGATCTGGAA GCTCGGCGGC
AACCCGGTGG TCCTCGCGGC CTTCGCCGGC TCGCTGTTCG GCGCGTTCGC GATCTGTGTG
CGGATCCTGC CGGACCTGCA TCCGGTGGCG CTGCTGACCG ACCCCGCGGC CTACGCCGGG
GTGGTCGCCT CGATCACCGG GTTCCTGTTC TTCACCACCG CGCTGCAACG CGGCTCGGTG
ACGATGGCGA CCGCGACGCT GGTGGTCGGC GAGACCGGGC TGCCGGCGCT GCTGGGCTTC
ACGCTCTTCC ACGACCACAC GCGGCACGGG TTCGTGCCGG TGGCCGTGGT CGGCTTCGTG
TGCGCGGTCG GCGGCGCGGT CGCGCTGTCC CGGTTCGGGG AAGCGGCGCC GCACTCGCCG
GACGGTCAGG ACGCGGACGC GGCCTCGGCG GAGTCGTCGG CCTGA
|
|---|
| Protein sequence | MGLVWGLVAA VGCALAYGAA TVFQAIGAGR TKDTAGAGVD PRVLIRALSQ LPFLAGVGLD
TVGLVADLIA LEKLPLFAVQ AIMNCSLAVT ALLAVPLLKA KLSRNDWIAV AAVVLGLILV
GISAGAEPPV HVGRGVHWAV LIAVVVLIAG SFFAIWKLGG NPVVLAAFAG SLFGAFAICV
RILPDLHPVA LLTDPAAYAG VVASITGFLF FTTALQRGSV TMATATLVVG ETGLPALLGF
TLFHDHTRHG FVPVAVVGFV CAVGGAVALS RFGEAAPHSP DGQDADAASA ESSA
|
|---|
| |