Gene Caci_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1369 
Symbol 
ID8332707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp1557137 
End bp1557730 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID644954517 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003112133 
Protein GI256390569 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.859804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC CTCCTGCCTC CGACCGCCGC GCCGAGCTGC TGGCCCTGGC CGCCGGCCTG 
TTCGCCGAGC GCGGCTATAA GAACACGACG GTGCGCGACA TCGCCGACGC CGCCGGGATC 
CTGTCCGGGA GCCTCTACCA CCACTTCGAC TCCAAGGAGA CGATGGCGGA CGAGATCCTG 
CGGACGTTCC TGGACGAGCT GTTCCGCGAC TACCGCGCGA TCGTCGAGCG GCAGAGCGAT 
CCGCGCCGCG CCTTCGAGCA GCTGGTCGAC GCCTCGTTCC AGGCGATCGA CCGCAGCCAC 
GCGGCGATCG CGCTGTACCA GAACGAGGCC AAGCAGCTGC GCCAGTCGCC GCGCTTCGCC 
TATCTGGACG ACACCGACCG CGAGTTCCGC GAGATCTGGC TCGGCACGCT GGAGAAGGGG 
ATCGCCTCCG GGGCGTTCCG CGCGGATCTG GACGCCACGA TGGCTTATCG CTTCGTGCGG 
GACACCGTGT GGGTGGCGGT GCGGTGGTAC ACGCCGGGCG GGAAGCTCAC CGCCGAGGCG 
GTCTCGGCGC AGTACCTGTC GATGATTCTC GAAGGGTTCC AGAGCAGGGA TTAG
 
Protein sequence
MPKPPASDRR AELLALAAGL FAERGYKNTT VRDIADAAGI LSGSLYHHFD SKETMADEIL 
RTFLDELFRD YRAIVERQSD PRRAFEQLVD ASFQAIDRSH AAIALYQNEA KQLRQSPRFA 
YLDDTDREFR EIWLGTLEKG IASGAFRADL DATMAYRFVR DTVWVAVRWY TPGGKLTAEA 
VSAQYLSMIL EGFQSRD