Gene Caci_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1364 
Symbol 
ID8332702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1552009 
End bp1552755 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID644954512 
Producthypothetical protein 
Protein accessionYP_003112128 
Protein GI256390564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.361689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.874866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA ACGCCACCCC GAACCGCGCC CCGATCGGCG CCCTGCGGAT GAGCACCATC 
GCCGTCGCCG GCGTGATCGT GGCGGTGGGT GTGCCGGCCG TCGCGGCGGC GATCGCGCTG
TCCACGCAGG TGAGCGACCA GCAGGCGCTG GTGAAGATCG ATGCCGCGGG CCCGATCTCG
CGGATCGTCA TCGCCGACTC CGACAGCGAC GTCCGGATCA CCGGCGACGC GGCCGCGAAC
GGCGTGACCG GGCAGGCGGT CGTGCAGTGG AAGGGTGAGG ACGGCAAGCG TCCGGCGCTG
CGGCAGAGCG TCTCCGGCGG GGTGCTGACC CTGATCAAGG ACTGCTCCGG GGGCGGCTGC
GGGCCGATCG ACATCATGGT GTCGGTGCCG CGGGACGTCT CGGTGCAGGC AACGACCTCC
GACGGGAACA TCGCTCTCAG CGGCGTCACC GGTCAGGTGG ACCTGACCTC GAGCGCAGGC
AGCATCGACG CCGACGGCCT GGGCTCGGCG AACGCCTCCT TCCACACCAC CAACGGCACC
ATCGACGCGG CCTTCACCGG CGCGCCGGCC CGGATCGTGG CCGAGACCAC GAACGCCTCG
GTGGCCATCG GCACCGACGG CCGGACCGCC TACTACGACG CGGTCCACAC CACCGACGGC
GTGGAGTCGC TGACCAACGC GCAGGACCGC ACCTCCCCCG ACGAGATCGA CGCGACCACC
ACCAACGGCG ACGTGACCAT CAGTTAG
 
Protein sequence
MTSNATPNRA PIGALRMSTI AVAGVIVAVG VPAVAAAIAL STQVSDQQAL VKIDAAGPIS 
RIVIADSDSD VRITGDAAAN GVTGQAVVQW KGEDGKRPAL RQSVSGGVLT LIKDCSGGGC
GPIDIMVSVP RDVSVQATTS DGNIALSGVT GQVDLTSSAG SIDADGLGSA NASFHTTNGT
IDAAFTGAPA RIVAETTNAS VAIGTDGRTA YYDAVHTTDG VESLTNAQDR TSPDEIDATT
TNGDVTIS