Gene Caci_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1344 
Symbol 
ID8332682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1528630 
End bp1529727 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content73% 
IMG OID644954492 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003112108 
Protein GI256390544 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCT CTGGCAGCGG TGTCAACAAG CCTGGTGCCG CCGCGGGTTC CGGACGGGCG 
GCGGTCGTCG GCAAGAACAA GAACCGGCTC ACCATCGCCG ACATCGCCCG CGAGGTCGGG
GTGTCGCCGA GCGCGGTCTC CTTCGCGCTC AACGGTCGCC CCGGTGTCAG TGAGGCTACC
CGCGCGCGGA TCCTCCAAGC CGCCGAACGG ATGAACTGGC ACCCGCACAG CGCCGCGCGC
GCCCTCGGCG GGGCGCCGGC CGGCGCGGTC GGCCTGGTGC TGGCGCGCCC GACCCGGACC
CTCGGCGCCG AGCCGTTCTA CGCACAGCTC ATCTACGGTA TGCAGTCAGT GCTGTCCGCG
CGCTCGGTCG CGCTGCTGTT GCAGGTCGTC GACGACACCG AGGCCGAACT CGCGGTCTAC
CGGCGCTGGT CCGGGGAGCA GCGGGTGGAC GGACTGCTGA TCGTGGACCC GCAGACCAAG
GACCCGCGGA TCGCCGCCGT GGAAGGCCTC GGCGTCCCGG CCGTGGTGCT CGGCGGGCAC
GGCAAGCACG GCGAGCTGCC GACGGTCTGG GCCGACGACC GCGAGGCGAT GCTGGAGACC
GTGCGCTATC TGGCCGCGCT CGGGCACTCC CGGATCGCGC ACGTCGCCGG CACCCCGGCC
TTCCAGCACA CGCAGCGGCG CATCAGGGCC CTGAAGGACG CGGCAGTACA GCTGGGCCTG
GCCGACACCC AGTCGGTCCC GACGGACTTC AGCGACGGCG AGGGCGCGGC GGTGACCCGG
CGTCTGCTCT CGCAGCCGGA CGCGCCGACC GCGATCGTGT ACGACAGCGA CCTGATGGCC
GTCGCCGGGC TCGGCGTCGC GACCGAGATG GGCGTGCGGG TGCCGGCCGA GCTGTCGATC
GTGTCGTTCG ACGACTCGGT GCTGACCCGC GTGGTGCATC CGGCGATCAC GGCGCTGTCG
CGGGACACGC ACGCTTTGGG CGTGCAGGTC GCCGAGGCTC TGCTGCGGAT CGTCGAGGAG
CCCGGGACGG TCGGGGACAT CAAGGCCGCG ACGCCTCGGC TGACGGTGCG GGAGAGCACG
GCGAAGCCGG GGCGGTGA
 
Protein sequence
MPTSGSGVNK PGAAAGSGRA AVVGKNKNRL TIADIAREVG VSPSAVSFAL NGRPGVSEAT 
RARILQAAER MNWHPHSAAR ALGGAPAGAV GLVLARPTRT LGAEPFYAQL IYGMQSVLSA
RSVALLLQVV DDTEAELAVY RRWSGEQRVD GLLIVDPQTK DPRIAAVEGL GVPAVVLGGH
GKHGELPTVW ADDREAMLET VRYLAALGHS RIAHVAGTPA FQHTQRRIRA LKDAAVQLGL
ADTQSVPTDF SDGEGAAVTR RLLSQPDAPT AIVYDSDLMA VAGLGVATEM GVRVPAELSI
VSFDDSVLTR VVHPAITALS RDTHALGVQV AEALLRIVEE PGTVGDIKAA TPRLTVREST
AKPGR