Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1344 |
Symbol | |
ID | 8332682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1528630 |
End bp | 1529727 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954492 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003112108 |
Protein GI | 256390544 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCT CTGGCAGCGG TGTCAACAAG CCTGGTGCCG CCGCGGGTTC CGGACGGGCG GCGGTCGTCG GCAAGAACAA GAACCGGCTC ACCATCGCCG ACATCGCCCG CGAGGTCGGG GTGTCGCCGA GCGCGGTCTC CTTCGCGCTC AACGGTCGCC CCGGTGTCAG TGAGGCTACC CGCGCGCGGA TCCTCCAAGC CGCCGAACGG ATGAACTGGC ACCCGCACAG CGCCGCGCGC GCCCTCGGCG GGGCGCCGGC CGGCGCGGTC GGCCTGGTGC TGGCGCGCCC GACCCGGACC CTCGGCGCCG AGCCGTTCTA CGCACAGCTC ATCTACGGTA TGCAGTCAGT GCTGTCCGCG CGCTCGGTCG CGCTGCTGTT GCAGGTCGTC GACGACACCG AGGCCGAACT CGCGGTCTAC CGGCGCTGGT CCGGGGAGCA GCGGGTGGAC GGACTGCTGA TCGTGGACCC GCAGACCAAG GACCCGCGGA TCGCCGCCGT GGAAGGCCTC GGCGTCCCGG CCGTGGTGCT CGGCGGGCAC GGCAAGCACG GCGAGCTGCC GACGGTCTGG GCCGACGACC GCGAGGCGAT GCTGGAGACC GTGCGCTATC TGGCCGCGCT CGGGCACTCC CGGATCGCGC ACGTCGCCGG CACCCCGGCC TTCCAGCACA CGCAGCGGCG CATCAGGGCC CTGAAGGACG CGGCAGTACA GCTGGGCCTG GCCGACACCC AGTCGGTCCC GACGGACTTC AGCGACGGCG AGGGCGCGGC GGTGACCCGG CGTCTGCTCT CGCAGCCGGA CGCGCCGACC GCGATCGTGT ACGACAGCGA CCTGATGGCC GTCGCCGGGC TCGGCGTCGC GACCGAGATG GGCGTGCGGG TGCCGGCCGA GCTGTCGATC GTGTCGTTCG ACGACTCGGT GCTGACCCGC GTGGTGCATC CGGCGATCAC GGCGCTGTCG CGGGACACGC ACGCTTTGGG CGTGCAGGTC GCCGAGGCTC TGCTGCGGAT CGTCGAGGAG CCCGGGACGG TCGGGGACAT CAAGGCCGCG ACGCCTCGGC TGACGGTGCG GGAGAGCACG GCGAAGCCGG GGCGGTGA
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Protein sequence | MPTSGSGVNK PGAAAGSGRA AVVGKNKNRL TIADIAREVG VSPSAVSFAL NGRPGVSEAT RARILQAAER MNWHPHSAAR ALGGAPAGAV GLVLARPTRT LGAEPFYAQL IYGMQSVLSA RSVALLLQVV DDTEAELAVY RRWSGEQRVD GLLIVDPQTK DPRIAAVEGL GVPAVVLGGH GKHGELPTVW ADDREAMLET VRYLAALGHS RIAHVAGTPA FQHTQRRIRA LKDAAVQLGL ADTQSVPTDF SDGEGAAVTR RLLSQPDAPT AIVYDSDLMA VAGLGVATEM GVRVPAELSI VSFDDSVLTR VVHPAITALS RDTHALGVQV AEALLRIVEE PGTVGDIKAA TPRLTVREST AKPGR
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