Gene Caci_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1341 
Symbol 
ID8332679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1526870 
End bp1527769 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content75% 
IMG OID644954489 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003112105 
Protein GI256390541 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC TCCCGGATCT GGACGCGCTC CAGCTGCTGG TCGCCGTCGC CGACACCGGC 
TCCCTCGGCA AAGCCGCTGC CCGGACCGGC ATCAGCCAGC CCTCGGCCTC GGCCCGGATG
GCGACGCTGG AGCGCCGGCT CGGGCTCAAA CTGCTGGCGC GCACCACCTC CGGCTCCCGC
CTGACCAGCG ATGGAGCCAT GGTCACCGAC TGGGCCCGCC GGGTCCTGGA GCAGGCCGAG
GCGCTGGTCG AGGGTGCCGA AGCGCTGCGC ACGCACGCCG ACGAGCGTCT GGCCGTGGCC
GCCAGCCTGA CCATCGCCGA GCACCTGATG CCCACATGGC TCATCGAGCT GCGGCAGCTG
CGGCCCGCCA TCCGCGTCGG GCTGACCGTG GAGAACTCCC ACCAAGTGGT CGCCGCGCTG
CGGGCCGGCC AGGTGGAGCT GGGATTCGTC GAGGGTCCGT GGGTTCCGCG CGACCTGCAC
TCGGCGGTCG TCGGACGGGA CCGCCTCGTC GTGGTGGTGG CGCCGGCGCA TCCGTGGGCA
CGGCGCAAGG AACCGCTGAC CGCCGCCGAA CTCGCCGCCG AACCGCTGCT GCTGCGCGAA
CCCGGCTCCG GGACGCGCGA GGTGCTGGAG GCGGCGTTGT CCGCCCACGA CGGCCCGGCG
GTCCCCCTGA TCGAGCTGGG AGCGACGGCG CCGCTGCGCT CGGCCGCGCT GTCCGGGAGT
GGGCCGGCGG TCCTGAGCGT GCTTGCGGTC GCCGAGGACA TCGCCGCCGG ACGCCTCGCC
GAGGTGCCGC TCGCCGAGGA CGTGGCGCTG CGCCGCACGT TGCGCGCGGT GTGGGTGCGC
GGGAGGGAGT TGAACGAGGC GGCCGGGTGG CTGGTGCAGG TCGCGCGCGG CCGCGGTTAG
 
Protein sequence
MTRLPDLDAL QLLVAVADTG SLGKAAARTG ISQPSASARM ATLERRLGLK LLARTTSGSR 
LTSDGAMVTD WARRVLEQAE ALVEGAEALR THADERLAVA ASLTIAEHLM PTWLIELRQL
RPAIRVGLTV ENSHQVVAAL RAGQVELGFV EGPWVPRDLH SAVVGRDRLV VVVAPAHPWA
RRKEPLTAAE LAAEPLLLRE PGSGTREVLE AALSAHDGPA VPLIELGATA PLRSAALSGS
GPAVLSVLAV AEDIAAGRLA EVPLAEDVAL RRTLRAVWVR GRELNEAAGW LVQVARGRG