| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1328 |
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| Symbol | |
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| ID | 8332663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1508274 |
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| End bp | 1509632 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954474 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003112093 |
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| Protein GI | 256390529 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.47915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCAC CTCTCGAAAG GCTCAGGCCT CTGCGCACCG CACTGGCAGG AGCCTGTGTC
CTGGGCATCG TGGCGACCGC CGCGATCAGC ACGAGCGCGA ACGCGGCGAC CGTCCACCCC
GCCGCGATCC CCGCTCACTA CGCCGCCCCC TACCTCGAGC TCGGCAACGG CTCGGTCGGC
GACATGGCCG CCGACATGAG CGCCTCCGGC GACGCGCGCT ACACGCTGGC GTTCCTGATC
CCGCAGTCCG GCTGTACGCC GATGTGGGAA GCCGGCAACT ACTCCGTCGG CTCGTTCAGC
TCGCAGATCA ACGCGCTGAA GGCGGCCGGC GGCGACGTCA TCATCTCCTT CGGCGGCGCC
GAGGGCGGCG AGCTGGCGCA GACCTGCACC AACGTCTCGT CGCTGACCGC GGCGTACAAG
AACATCGTCG ACACCTACGG CGTCACCCGG CTCGACTTCG ACATCGAGGG CGGCGTCCTG
GGCGACACCG GCGCGACGAC CCGGCGCAAC CAGGCCCTGG CCGCGCTCCA GCGCGCGGAG
CCGGCCGTCC AGGTCGACTA CACGCTCGCG GTCGACCCCA CCGGCCTGCC GGGCGGCCAG
ATCAACCTGC TGCAGGACGC GAAGAACCAG GGCGTGAACG TCAACGTCGT CAACCTGATG
ACGATGGACT ACTACGACGG CCAGCCGGTC ATCAACGACG CCCTGTCCTC CGCGCGCGCC
GCGGCCGGCC AGATCGCGAG CCTGTACGGC ATATCGACCT CCGCCGCGTA CGGCAAGGAG
GGCCTGACCC CGATCGCCGG CCGGAACGAC GACGGCGCGA TGTTCTCCCA GGGCGACGCG
CAGACCCTGG AGTCCTTCGC GGCGAGCAAC GGCGTCGCAG AGCTCTCCTT CTGGGAGGTC
GACAGCTACG ACAAGGCCAC CGGCTACGCG TACTCCCGGA TCTTCAACGC CATCACCGGA
GGCGGCACCA CCCCGCCCCC GCCGACCGGC GGCCAGATCA CCGGCTACCA GGGCCTGTGC
CTGGACGACC GCTCGGCCTC CACGGCCAAC TTCAACCCGA TCCAGGTCTA CACCTGCAAC
GGCAGCAGCG CGCAGAGCTG GACCGTGGCC AACAACACCC TGAAGGTCCT CGGCAAGTGC
CTGGACGTCA ACGCCGCCGG CACCGCCAAC GGCACCGTCG TCGACCTCTA TGACTGCAAC
GGCACCAGCG CGCAGACCTG GGTCCCGCAG TCGAACGGCG AGCTGTTGAA CCCCAACTCC
GGCAAGTGCC TGGACGACAC CGGCTTCGGC GGCTCCGGCA CCCAGGCCCA GATCTGGACC
TGCGCCGCCA GCGCCAACCA GAAGTGGAAC CTGCCTTGA
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| Protein sequence | MIPPLERLRP LRTALAGACV LGIVATAAIS TSANAATVHP AAIPAHYAAP YLELGNGSVG
DMAADMSASG DARYTLAFLI PQSGCTPMWE AGNYSVGSFS SQINALKAAG GDVIISFGGA
EGGELAQTCT NVSSLTAAYK NIVDTYGVTR LDFDIEGGVL GDTGATTRRN QALAALQRAE
PAVQVDYTLA VDPTGLPGGQ INLLQDAKNQ GVNVNVVNLM TMDYYDGQPV INDALSSARA
AAGQIASLYG ISTSAAYGKE GLTPIAGRND DGAMFSQGDA QTLESFAASN GVAELSFWEV
DSYDKATGYA YSRIFNAITG GGTTPPPPTG GQITGYQGLC LDDRSASTAN FNPIQVYTCN
GSSAQSWTVA NNTLKVLGKC LDVNAAGTAN GTVVDLYDCN GTSAQTWVPQ SNGELLNPNS
GKCLDDTGFG GSGTQAQIWT CAASANQKWN LP
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