| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1313 |
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| Symbol | |
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| ID | 8332648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1489333 |
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| End bp | 1491504 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954459 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003112078 |
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| Protein GI | 256390514 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGA CCACCGCCGC TACCCCGGCG CAGCAGCACG CGGCCCTCGC CGAGGAGATC
GAGAACGCGC GCTACCGCTA CTACGTGCTC GACGCGCCGA CGATCAGCGA CGCCGACTTC
GACGTGAAGC TGCGGCAGCT CGAGGCGATA GAGGATGCCA ACCCGGAGCT GCGCACCCCG
GACTCCCCGA CCCAGAAGGT GGCCGGCGCC TACGAGACCG AGTTCACCTC GGTCCCGCAC
CTGGAGCGCA TGCTCTCGCT GGACAACGCG TTCACCGCCG AGGAGTTGCA GACCTGGGCC
GACCGCATCG AGAAGGACCT CGGTGCGCTG CCGGAGCTGC TGTGCGAGCT GAAGGTCGAC
GGCCTGGCGA TCAACCTGCT CTACGAGAAG GGCAAGCTCA CCCGGGCCCT GACCCGCGGC
GACGGCCGGA CCGGCGAGGA CATCACGCCG AACGCCAAGA CCATCCAGAC CATCCCGCAG
ACCCTGACCG GGACCGATGA GTTCCCGGTC CCGGAGCTGG TCGAGGTCCG CGGCGAGGTC
TACTTCGCGG TCCAGGCGTT CGACGAGTGG AACGAGAAGA TCCTCGCCGA GACCGGCCGC
TCCTACGCCA ACGCGCGCAA CGCCGCGGCC GGCTCGCTGC GCCAGAAGGA CCCGCGCGTC
ACCGCGCAGC GGCCGCTGTC GATGGTGGTG CACGGCATCG GCGCCAGGAA GGGCTTCACC
CCGACCTCGC AGTCGCACTC CTACGAGGCG CTGCGGGCCT GGGGTCTGCC GACCTCCGAC
CGGGTCAAGG TCGTCAAGAC CCTGAAGGAC GTCCAGAAGT ACATCGACTA CTACAACAAG
CACCGGCACG ACGTCGAGCA CGAGATCGAC GGCGTCGTGG TCAAGGTCGA CGCCCTGCCC
ATCCAGGGCC GCCTGGGCAG CACCTCCCGC GCCCCGCGCT GGGCCATCGC CTTCAAGTAC
CCGCCGGAGG AGGTCACCAC CAAGCTGCTG GACATCCGGG TCCAGGTCGG CCGGACCGGC
CGGGTGACGC CGTACGCGGT GATGGAGCCG GTCACCGTCG CCGGCTCGAC GGTCCAGAAC
GCCACGCTGC ACAACCAGGC GATCGTGGTG AAGAAGGGCC TGCTGATCGG CGACACCGTG
GTCCTGCGCA AGGCCGGCGA CGTCATCCCG GAGATCGTCG GCGCGGTCCA GGACCTGCGC
GACGGCTCCG AGCGCGAGTT CGTGATGCCC GAGAACTGCC CCGACTGCGG GACCAAGCTG
GCGCCGCAGA AGGAAGGCGA CATCGACCTG CGCTGCCCGA ACTCGCAGTT CTGCCTCGGC
CAGATCCGCG AGCGCATCGA CTTCATGGGC AGCCGCAACG CCCTGGACAT CGAGGCGCTG
GGCTATGAGT CGGCGGTCGC GCTGACCCAG CCGGCCGCCG GTACCGCGCC GGTGCACGAC
GAGGGCGATC TGCTGAGCCT GAAGCTCGAA GACCTCGCCG ACCTCAAGAT GCTCCAGTCC
AAGCGCGGCG CGGACGCCAA ACCCGGCGAG ACCGAGCTGG TGCCGTACTT CTTCACCAAG
GGCACGCCGA AGAAGCCCAG CGTCCCGACC GCCACCACCG AACTGCTGCT GCAGCAGCTG
GAGCTGGTGA AGACCGACCG GCCGCTGTGG CGCTTCCTGG TCTCGCTGTC GATCCGGCAC
GTCGGCCCGA CCGCGGCCCG CGTCCTGGCC CGCGAGTTCC CGTCCTTCGA CGCCCTGGCG
AACGCTACCG AGGAGGACCT CAAGGCCGCC AACGGCATCG GCCCGACCAT CGCCACCGCG
ATCGTCGAGT GGTTCGCCGT GGACTGGCAC CGCGCCATCA TCGGCAAGTG GCAGGCGGCC
GGGGTGGTGC CTGTTGTGGA GTCGCAGCCG GAAGGGCCGA GGCCTCTTGA GGGATTGAGC
GTGGTCGTAA CGGGCACATT GGCCGGATTC ACCCGGGATG GTGCCGCCGA GGAACTCACC
AGCCGGGGCG CCAAAGTGAG CGGTTCGGTG TCGAAGAAGA CCTCGTTCGT GGTGGTCGGG
GACAATCCGG GGACCAAGTA CGACAAGGCG TTGAGCCTCG GGGTCAAGGT GCTGGACGAA
GAGGGATTCA AGGTCCTGTT GGGGGACGGT CCCCAGGCCG CTGCCGATAC AGTGACGGAA
GCAGAGGCCT GA
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| Protein sequence | MDETTAATPA QQHAALAEEI ENARYRYYVL DAPTISDADF DVKLRQLEAI EDANPELRTP
DSPTQKVAGA YETEFTSVPH LERMLSLDNA FTAEELQTWA DRIEKDLGAL PELLCELKVD
GLAINLLYEK GKLTRALTRG DGRTGEDITP NAKTIQTIPQ TLTGTDEFPV PELVEVRGEV
YFAVQAFDEW NEKILAETGR SYANARNAAA GSLRQKDPRV TAQRPLSMVV HGIGARKGFT
PTSQSHSYEA LRAWGLPTSD RVKVVKTLKD VQKYIDYYNK HRHDVEHEID GVVVKVDALP
IQGRLGSTSR APRWAIAFKY PPEEVTTKLL DIRVQVGRTG RVTPYAVMEP VTVAGSTVQN
ATLHNQAIVV KKGLLIGDTV VLRKAGDVIP EIVGAVQDLR DGSEREFVMP ENCPDCGTKL
APQKEGDIDL RCPNSQFCLG QIRERIDFMG SRNALDIEAL GYESAVALTQ PAAGTAPVHD
EGDLLSLKLE DLADLKMLQS KRGADAKPGE TELVPYFFTK GTPKKPSVPT ATTELLLQQL
ELVKTDRPLW RFLVSLSIRH VGPTAARVLA REFPSFDALA NATEEDLKAA NGIGPTIATA
IVEWFAVDWH RAIIGKWQAA GVVPVVESQP EGPRPLEGLS VVVTGTLAGF TRDGAAEELT
SRGAKVSGSV SKKTSFVVVG DNPGTKYDKA LSLGVKVLDE EGFKVLLGDG PQAAADTVTE
AEA
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