| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1290 |
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| Symbol | |
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| ID | 8332625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1465604 |
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| End bp | 1466614 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644954437 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003112056 |
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| Protein GI | 256390492 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00484259 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTCCT ACATCATCAG GCGTCTGTTC TCAGCAGTGA TACTGCTGTT CGTGATCAGC
CTGATCACGT TCTTCATCTT CTACGTCTTC CCACGCCTGG GCGGGCAGAC GACGGAGTCG
CTGGCGGAAC AGTTCGTCGG CAAGACCCAG AACCCCCAGG CGATCGCCGC GGTCATCCAC
CGCTTCGGAT TCGACCAGTC GGTCTGGGTG CAGTACGGGC GTTTCATCAA GGGCATTTTC
GTCGGGTACG ACTACGACAC CGGCACGCGG ATGTCACACT GCCCGGCTCC GTGCCTGGGC
TACTCGTTCA AGACCAACAA CCTGGTGACC GACAGCATCG GCCAGTGGCT TCCGGTGACG
ATCTCCCTGG CCGTCGGCGC CTCGGTGCTG TGGCTGGTCT TCGGTGTCGC CGTCGGTGTC
GCCTCCGCCC TGAAGAAGGG CAGCGTCGTG GACCGCGCCG GCATGATCAC CGCGCTGGTC
GGCGTCTCGC TGCCGGTCTA CTTCGTCGGC CCGCTGCTGT CGCTGGTGTT CGTGGTCAAC
TGGCACATCC TGCCGGACCC CGGCTACGTC CACATCACCC AGGACCCCTG GGGCTGGTTC
ACGCACCTGC TGCTGCCGTG GATCGCCGTG GCGTTCGGCC TCGCGGCCCT GTACGCCCGC
CTCACCCGGG TCGGCATGCT GGACACCATG AACGAGGACT TCATCCGCAC GGCGCGGGCC
AAGGGCCTGC CTGAGCGGAC GGTCATCTTC AAGCACGCGC TGCGCGCGGC ACTGACCCCG
ATCGTCACCA TCTTCGGTAT GGACCTCGGC TTCGCCCTCG GCGGTGTCGT GCTCGCCGAG
CAGGTGTTCA ACCTGCCGGG CATCGGGCGC GAGGCGGTCG ACGCGGTGGG CCAGTCCGAC
CTGCCCGTCA TCATGGGCGT CACGATCGTG GCCAGCGCCT TCATCGTGCT GGCGAACCTG
GTCGTCGACC TGCTGTACGG CGTCGTCGAC CCCCGAGTGA GGGTCTCATG A
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| Protein sequence | MISYIIRRLF SAVILLFVIS LITFFIFYVF PRLGGQTTES LAEQFVGKTQ NPQAIAAVIH
RFGFDQSVWV QYGRFIKGIF VGYDYDTGTR MSHCPAPCLG YSFKTNNLVT DSIGQWLPVT
ISLAVGASVL WLVFGVAVGV ASALKKGSVV DRAGMITALV GVSLPVYFVG PLLSLVFVVN
WHILPDPGYV HITQDPWGWF THLLLPWIAV AFGLAALYAR LTRVGMLDTM NEDFIRTARA
KGLPERTVIF KHALRAALTP IVTIFGMDLG FALGGVVLAE QVFNLPGIGR EAVDAVGQSD
LPVIMGVTIV ASAFIVLANL VVDLLYGVVD PRVRVS
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