Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1270 |
Symbol | |
ID | 8332605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1440299 |
End bp | 1442560 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644954417 |
Product | Ig family protein |
Protein accession | YP_003112036 |
Protein GI | 256390472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.902068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCTTAT ACCCCACCCT CCAAGAATGG ACCGAGAACC GGTTCAGAGA GGAAAACCAC GTGCATCGGG TCCCACTCAG AGCGACGGCA GGCATAGCAG CAGCGGCGAT CACGCTGTTC GCCTCCGCCG CCAACGGATG GGCGACGGCA CAGCCGTCGG CCTCCGGCTC CACCACGTCG AGCACGGCGA CGCAGAACCC GTATGACCCC ACGTACGGCC ACCCCTACCG GCACGGGGCC GTCCCGACCA TCCAGCAGAA CCAGAAGGAG AAGGCCTGGA ACGCCTCGCA CCCGAGCAGC AACGCCGTCA ACGCGGCGAC CGGTCCGGAG ACGCTGTCCT ACGGCGGCGG CATCGACGGC ATAGGCGTGC AGGACGGCGG CAAGAGCAAG GTCTACCTCG TCTTCTACGG CTCCCAGTGG GGAACGCAGA GCACCGACTC CAACGGCAAC GCCAAGTTCA CCGGCGACCC GGACGGCGGC GCCTCGGTCG CGCAGCAGAT GTTCAAGGGC ATCGGCACCA ACGGCGAGCT GTGGTCCGCG GACCTGACGC AGTGGTGCGA CGGCCCGGGC GTGGCCACCG GCGCGGTCGC CTGCCCGACC AACCTGCCCG CCTCGCAGTA CATCAACTAC CAGAGCGGCG GCGTGCTGGC CGGCGTCTGG GAGGACAACT CCACGGCTTC CCCGAGCACC GCGTCCGGCC ACCAGCTGGG CCAGGAGGCG GTGAACGCGG CGGCGCACTT CGGCAACACC ACCGCGGCGG CCAACCGCGA CGCCTACTAC GTCATCCTCT CCCCGCACGG CACGAACCCG GACAGCTACC AGGGTCAGTA CTGCGCCTGG CACGACTACA ACGGTGACAG CACCCTGACC GGCGGCGCGG TGAGCTCGCC CTACGGCGAC ATCGCCTTCT CCAACCAGCC GTACAACATG GACTCCGGCG CCGGCTGCGG CGTGGGCTTC ATCAACTCCC CCGGAACCCT GGACGGCTAC ACCATCACCA TGGGCCACGA GTGGCACGAG ATGATGTCCG ACCAGAACCC GGCCGGCGGC TGGACCAACA ACACCGGCTC GTCCTACAAC GGCCAGGAGA ACTCCGACGA GTGCGCGTGG CTGGCTCCCG GCACCACCGG CGGCGGCGCG AACGTCTCCT TCGGCTCCTT CGGCACCTAC CCCGAGCAGG CTTCGTGGTC GAACGACACC AACGCCTGCG CGATCTCGCA CCCGATCGTC AACCACGGCA CGACCGAGAC GGTCTCGGTG ACCAACCCCG GCAACCGGAC CTCGACGCAG GGTACTGCGA TCGGCACGCT GCAGATCTCG GCGACCGACT CCGCGGGCAA GTCGCTGACC TACTCGGCCA CCGGGCTTCC GGCCGGTCTG TCGATCAGCA GCTCCGGCGC CATCACCGGC ACCCCGACCG GTACCGGCAC CTCGTCGGTC ACCGTGACGG CGTCTTCGGG GACCGCTTCG GGCAGCACGT CGTTCACGTG GACGGTGAAC CCGCAGGGCG GGACCGAGAC GGTCTCGGTC ACCAACCCGG GCAACCAGAC CTCGACGCAG GGCACTGTCA TCAGCACCCT GCAGATCTCG GCGTCTGACT CGGCGGGCAA GTCGCTGACG TACTCGGCTT CCGGTCTCCC GGCCGGTCTG TCGATCAGCT CCAGCGGCGC CATCACCGGC ACGCCGAGTG CCGCCGGCAC CTCGTCGGTC ACCGTTACCG CGTCCTCGGG CACCGCGTCG GGTTCGACGT CCTTCACCTG GACGGTCAAC GGCACCGGCG GCGGATGCAC CGCGGCCCAG CTCCTGGGCA ACGCCGGCTT CGAAACCGGT AGCGCCTCCC CGTGGACCGC CTCGGCGGGC GTCATCGACA GCAGTTCCTC CGAGCCGGCT CACACCGGTT CCTGGAAGGC CTGGATGGAC GGCTACGGCA CCACCCACAC CGACACCCTG TCCCAGAAGG TGACCATCCC GGCCACCTGC AAGACGGCGA CCTTCGCCTT CTGGCTGCAC ATCGACACCT CGGAGACCAC CACCTCCACC GCCTACGACA AGCTGTCGGT GCAGGTCCTG AACTCCGCCG GCACCGTCGT CGGCACCCTG GCCACCTACT CCAACCTCAA CCACAACACC GGCTACACCC AGCACTCCTT CAGCCTGGCC AGCTACATCG GCCAGACCAT CACCCTGAAG TTCACCGGCG CCGAGGACTC CTCGCTGCAG ACCTCCTTCG TCGTGGACGA CAACGGTCTG AACGTGAACT GA
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Protein sequence | MSLYPTLQEW TENRFREENH VHRVPLRATA GIAAAAITLF ASAANGWATA QPSASGSTTS STATQNPYDP TYGHPYRHGA VPTIQQNQKE KAWNASHPSS NAVNAATGPE TLSYGGGIDG IGVQDGGKSK VYLVFYGSQW GTQSTDSNGN AKFTGDPDGG ASVAQQMFKG IGTNGELWSA DLTQWCDGPG VATGAVACPT NLPASQYINY QSGGVLAGVW EDNSTASPST ASGHQLGQEA VNAAAHFGNT TAAANRDAYY VILSPHGTNP DSYQGQYCAW HDYNGDSTLT GGAVSSPYGD IAFSNQPYNM DSGAGCGVGF INSPGTLDGY TITMGHEWHE MMSDQNPAGG WTNNTGSSYN GQENSDECAW LAPGTTGGGA NVSFGSFGTY PEQASWSNDT NACAISHPIV NHGTTETVSV TNPGNRTSTQ GTAIGTLQIS ATDSAGKSLT YSATGLPAGL SISSSGAITG TPTGTGTSSV TVTASSGTAS GSTSFTWTVN PQGGTETVSV TNPGNQTSTQ GTVISTLQIS ASDSAGKSLT YSASGLPAGL SISSSGAITG TPSAAGTSSV TVTASSGTAS GSTSFTWTVN GTGGGCTAAQ LLGNAGFETG SASPWTASAG VIDSSSSEPA HTGSWKAWMD GYGTTHTDTL SQKVTIPATC KTATFAFWLH IDTSETTTST AYDKLSVQVL NSAGTVVGTL ATYSNLNHNT GYTQHSFSLA SYIGQTITLK FTGAEDSSLQ TSFVVDDNGL NVN
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