Gene Caci_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1239 
Symbol 
ID8332574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1406499 
End bp1407272 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID644954386 
ProductMethyltransferase type 11 
Protein accessionYP_003112005 
Protein GI256390441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0387045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCCA TGGACCGCAC TTTCGAGGAA CTGATCGCGG AGGCCGACGC GGTCGACGTC 
AGCGGCTGGG ACTTCTCCTG GCTGGACGGC CGCGCCGCCG AGGAGCGCCC GCCGTGGGGA
TACCAGCGGC AGCTGGGTGA GCGCGTCGGC GCCGCGCACC TGCACCTGGA CATCCAGACC
GGCGGCGGCG AGGTGCTCGC CGGCGTGCCG CAGCGGGCGT CCGGCGCCAC GGTCGCCACC
GAGGGCTGGC CGCCGAACAT CGCGATCTCC CAGCAGAACC TGCGGGACAA GGGCGTGGTC
ATCGTCTTCG ACGAGGACGA GCCGCCGCTG CCCTTCGCCG ACAACACCTT CGACCTGGTG
ACCAGCCGCC ATCCGGTGAT GGCGCACTGG CGCGAGATCG CGCGGGTGCT GGCGCCGGGC
GGTACCTACT TCTCGCAGCA CATCGGTCCG GACAGCGGCC ACGAGGTCTA CGAGTGGTTC
CTCGGTCCCA AGCCCACCGG CAAGAGCTTC CGCGAACCGG CGCTGGCGCG TCAGGAGGCT
GAGAAGAACG GGCTGGAGAT CGTCGGCCTG GAAGAAGCCG AGCTGAAGAT GGAGTTCTTC
GACATCGGCG CGATGGTCTA CTTCCTGCGC AAGGTGATCT GGTTCGTGCC GGACTTCACC
GTCGAGAAGT ACCGCGACGA TCTGCTGCGC ATGCACGAGC ACATGGAGCG CGAGGGCTCG
TTCGTGGCGT ACTCGCGGCG CTTCCTCATC GAGGCGCGTA AGCCTGGAGC CTGA
 
Protein sequence
MCAMDRTFEE LIAEADAVDV SGWDFSWLDG RAAEERPPWG YQRQLGERVG AAHLHLDIQT 
GGGEVLAGVP QRASGATVAT EGWPPNIAIS QQNLRDKGVV IVFDEDEPPL PFADNTFDLV
TSRHPVMAHW REIARVLAPG GTYFSQHIGP DSGHEVYEWF LGPKPTGKSF REPALARQEA
EKNGLEIVGL EEAELKMEFF DIGAMVYFLR KVIWFVPDFT VEKYRDDLLR MHEHMEREGS
FVAYSRRFLI EARKPGA