Gene Caci_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1215 
Symbol 
ID8332550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1370194 
End bp1371009 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content76% 
IMG OID644954362 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_003111981 
Protein GI256390417 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGCG CCAGCCGCGA GGCCCTGGCC GCCGGAGCGG ACCGTCTCGA CGCGCTGACC 
TCGGCGCCCG GCGCTGACAT CGCCGCCGTC GCCGACGACC TGTCGGCCGT GGCGGTGGCC
TTCGGCAAGG ACGCCTCGCT GCGCCGCATG CTGACCGACC CGGCCCGCCA GCCGGCCCAG
CGCGCGGACA TCGCGACCGC GCTGCTCGCC GGCAAGATCG GCGCCGACGC CGCCGCCCTG
GTGGCCGGCA TGGCGCGCTC GCGCTGGAGC GCTCCGCGCG ATCTGGCCGA CGCCGTGGCG
GACCTGGCGG TCCGCGCCGA CCTGGCGGTC GCCGAGCGGG ACGGCAAGCT CGACGACGTC
GAGGACGAGC TGTTCCGGCT CAGCCGGCTG CTGGACTCCA ACGGCGAGCT GGCGCTGGCC
CTGGCCGATG GCCGGGTCCC GGCGGACAAG CGGGTCGCGC TCGTGGACGG CCTGCTCTCG
GGCAAGGTCG ACGTCACGAC CTACCGCCTG GTGGGACGCC TGGTGGCCGC CCCGCGCGGC
CGGTCGATCA GCGCCGGCCT GACCGAGATC GGCAAGGAGG CGGCAGCGCG CCGCCAGCGG
CTGATCGCCT ACGTGACCGC GGCGGTCCCG ATGACCGAGC AGCAGCGCGA CCGTCTGGCG
GCGGTGCTCA AGCGGCTGTA CGGCCGGCAG GTCCACCTGA ACGTGGATCT GGACCCGGCG
GTGCTGGGCG GACTGTCGGT GCGGGTCGGC GACGAGGTCG TCGACGGCAC GGTGGCCACC
CGGCTGGGAC AGGCCCAGCG GCAGCTGGCC GGCTGA
 
Protein sequence
MQGASREALA AGADRLDALT SAPGADIAAV ADDLSAVAVA FGKDASLRRM LTDPARQPAQ 
RADIATALLA GKIGADAAAL VAGMARSRWS APRDLADAVA DLAVRADLAV AERDGKLDDV
EDELFRLSRL LDSNGELALA LADGRVPADK RVALVDGLLS GKVDVTTYRL VGRLVAAPRG
RSISAGLTEI GKEAAARRQR LIAYVTAAVP MTEQQRDRLA AVLKRLYGRQ VHLNVDLDPA
VLGGLSVRVG DEVVDGTVAT RLGQAQRQLA G