Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1208 |
Symbol | |
ID | 8332543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1363446 |
End bp | 1365371 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954355 |
Product | hypothetical protein |
Protein accession | YP_003111974 |
Protein GI | 256390410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGAATC AGGGAACGGA TACCGGCGTG CCCGAAGGGA TCGGCACCGA CGTCTCGGAC GCGGCGGACG TCTCGGACGC GGTGCACGAG CCGGCCGCGT CCGGCGATCC CGGGTCGGTC GGGCAGCAGG GCACAGCCGC ACCCACAGCG GGTGGCGAAA CCATTCCCCG CCAACGCCGC CCCCTGCTCG ACGCCGTCCA TCCGGTTCGC GCGGTCACGG CGTTCCACCG CCGCCACCAC CCCGTCACCC TCGTCGCCAT AGCCGCGACC ACCCTCGCCT ACGCCGCGCT GGCCTACCAC CGCCGCTGGA TAGCCGACGA CGGCATGATC GCCGTCCGCA CCGTCCGCCA GATCCTCGCC GGCCACGGTC CCGTCTACTC GCCCTACGAG CGCGCCGAGA CCGACACCTC GACCCTGTGG ACGCTGCTGC TCACCATTGG CGGCGGCGTC ACCGGAGTCG ACGTCGCGCG CGTCGCCGTC CTCACCGGCC TGCTGTGCGC GGTGGGCGGC GTCGTCTCCG CCCTGTTCGC CACCGCCCGG CTGCACGCGC GCCTCAGCGC GAAGCCGCGG CGACCGCTGC TGCCGGCCGG CGCGCTGCTC CTGCTCGGCG TCTCGCCGTT CTGGGACTTC GCGACCTCCG GTCTGGAGAC CGGCCTGGAA ATCCTGTGGC TGGGCCTGTG CTGGCTGGCG CTGGTCGCCT GGTGCGCCGA GACGCCGGAC ACCAAGCGGC AGTACCTGGT GGCTCTGCTC ATCGGCCTGG CGCCCTTGGT CCGCCCCGAA TTCGCCCTGA TGGAAGCGGT CTTCGCCGTC GCGGCCTGGC TCCTCATCCG CCCCGGCAAG CGGCGCACGC TCCTGCTTTT CGTTACGGCG CAAGCCTTCC CGCTGATCAC CGAGATCTTC CGCGCGGGCT ACTACGGCGA GCTGGTCCCG CTCCCGGCGC TGGCGAAGTC CGCCGACGGT TCGCAATGGA ACCGCGGCTG GCGCTATGTC GAGGAAACAC TCAAGGGCTA CTTCGTCTGG ATTCCGTTGG CGATCCTGCT CGCCGCCGCG ATCGCTCATC TCATGAACAA GAGCGCGCTG AAGTCCCGCA CCACCACGAT CCTGCTGGCG ACGCCGGTGA CCGCCGGTCT GCTGCTCGGC CTTTATGTGG TCAAGGTCGG CGGTGACTTC ATGCACGCGC GCATGGTGCT GCCGGTCCTG TTCCTTCTTG TTCTCCCGGT CTTGGTGGTT CCGGTGACGG CGGTCCTGGT TCCGGCCGTC ACGGCGACCG CGGTCTGGGC CGCCTACTGC GGTTCCACCT ACTCGGTCCA CTTCTACGAC CAGAAACACG CCATCGCCGA GGACGAGCGC GTCGGCTACC AGCAATGGAC CGGACGGCCC AACCCGGAGA CCTCGGCGGC ATACACCAAC CGCGAGCGGG GAATCGGGGA GGCGATCGCC TCCTGGACGG CGCACGGGCA GCACGTCCTG ACCTCCGAGG GCGGGATCGA CGTCCCGCTC GATCCCAGCC TGCCCTTCCC CTTCGCCGTG GCCGCCGGGC GGCTCGGCGC GGCCGGCGCC GAGACCCCGC TGCGGGACGA GGTCGTCGAC ACGCTGGGAC TGGCGAACCC GCTCGGCGCG CACCTGACCG TCACCACCCC CGGCCGGCCC GGGCACGAGA AGGAGCTGCC GTGGGCGTGG ATCCTCGCCG ACTACGGCGA TCCGGCGGTC GTGGACACTC AAGAAGTTCT CAAGGGGGTT TCCCCGCAGC AGGTCGCCGC CGCGCGGCAC GCCATGGGCT GCGGCGCCCT GAAGGAACTG CTGGATTCGA CCAGACAGCC CATGACCTTC GGGCGGTTCT GGAGCAACCT CGCCGGCGCG GCGAGCCGGA CGGCGCTGGT CGTCCCGGCA GATCCGTTCG CGGCGGAGAA GAAGTTCTGC CGGTGA
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Protein sequence | MGNQGTDTGV PEGIGTDVSD AADVSDAVHE PAASGDPGSV GQQGTAAPTA GGETIPRQRR PLLDAVHPVR AVTAFHRRHH PVTLVAIAAT TLAYAALAYH RRWIADDGMI AVRTVRQILA GHGPVYSPYE RAETDTSTLW TLLLTIGGGV TGVDVARVAV LTGLLCAVGG VVSALFATAR LHARLSAKPR RPLLPAGALL LLGVSPFWDF ATSGLETGLE ILWLGLCWLA LVAWCAETPD TKRQYLVALL IGLAPLVRPE FALMEAVFAV AAWLLIRPGK RRTLLLFVTA QAFPLITEIF RAGYYGELVP LPALAKSADG SQWNRGWRYV EETLKGYFVW IPLAILLAAA IAHLMNKSAL KSRTTTILLA TPVTAGLLLG LYVVKVGGDF MHARMVLPVL FLLVLPVLVV PVTAVLVPAV TATAVWAAYC GSTYSVHFYD QKHAIAEDER VGYQQWTGRP NPETSAAYTN RERGIGEAIA SWTAHGQHVL TSEGGIDVPL DPSLPFPFAV AAGRLGAAGA ETPLRDEVVD TLGLANPLGA HLTVTTPGRP GHEKELPWAW ILADYGDPAV VDTQEVLKGV SPQQVAAARH AMGCGALKEL LDSTRQPMTF GRFWSNLAGA ASRTALVVPA DPFAAEKKFC R
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