Gene Caci_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1208 
Symbol 
ID8332543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1363446 
End bp1365371 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content71% 
IMG OID644954355 
Producthypothetical protein 
Protein accessionYP_003111974 
Protein GI256390410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGAATC AGGGAACGGA TACCGGCGTG CCCGAAGGGA TCGGCACCGA CGTCTCGGAC 
GCGGCGGACG TCTCGGACGC GGTGCACGAG CCGGCCGCGT CCGGCGATCC CGGGTCGGTC
GGGCAGCAGG GCACAGCCGC ACCCACAGCG GGTGGCGAAA CCATTCCCCG CCAACGCCGC
CCCCTGCTCG ACGCCGTCCA TCCGGTTCGC GCGGTCACGG CGTTCCACCG CCGCCACCAC
CCCGTCACCC TCGTCGCCAT AGCCGCGACC ACCCTCGCCT ACGCCGCGCT GGCCTACCAC
CGCCGCTGGA TAGCCGACGA CGGCATGATC GCCGTCCGCA CCGTCCGCCA GATCCTCGCC
GGCCACGGTC CCGTCTACTC GCCCTACGAG CGCGCCGAGA CCGACACCTC GACCCTGTGG
ACGCTGCTGC TCACCATTGG CGGCGGCGTC ACCGGAGTCG ACGTCGCGCG CGTCGCCGTC
CTCACCGGCC TGCTGTGCGC GGTGGGCGGC GTCGTCTCCG CCCTGTTCGC CACCGCCCGG
CTGCACGCGC GCCTCAGCGC GAAGCCGCGG CGACCGCTGC TGCCGGCCGG CGCGCTGCTC
CTGCTCGGCG TCTCGCCGTT CTGGGACTTC GCGACCTCCG GTCTGGAGAC CGGCCTGGAA
ATCCTGTGGC TGGGCCTGTG CTGGCTGGCG CTGGTCGCCT GGTGCGCCGA GACGCCGGAC
ACCAAGCGGC AGTACCTGGT GGCTCTGCTC ATCGGCCTGG CGCCCTTGGT CCGCCCCGAA
TTCGCCCTGA TGGAAGCGGT CTTCGCCGTC GCGGCCTGGC TCCTCATCCG CCCCGGCAAG
CGGCGCACGC TCCTGCTTTT CGTTACGGCG CAAGCCTTCC CGCTGATCAC CGAGATCTTC
CGCGCGGGCT ACTACGGCGA GCTGGTCCCG CTCCCGGCGC TGGCGAAGTC CGCCGACGGT
TCGCAATGGA ACCGCGGCTG GCGCTATGTC GAGGAAACAC TCAAGGGCTA CTTCGTCTGG
ATTCCGTTGG CGATCCTGCT CGCCGCCGCG ATCGCTCATC TCATGAACAA GAGCGCGCTG
AAGTCCCGCA CCACCACGAT CCTGCTGGCG ACGCCGGTGA CCGCCGGTCT GCTGCTCGGC
CTTTATGTGG TCAAGGTCGG CGGTGACTTC ATGCACGCGC GCATGGTGCT GCCGGTCCTG
TTCCTTCTTG TTCTCCCGGT CTTGGTGGTT CCGGTGACGG CGGTCCTGGT TCCGGCCGTC
ACGGCGACCG CGGTCTGGGC CGCCTACTGC GGTTCCACCT ACTCGGTCCA CTTCTACGAC
CAGAAACACG CCATCGCCGA GGACGAGCGC GTCGGCTACC AGCAATGGAC CGGACGGCCC
AACCCGGAGA CCTCGGCGGC ATACACCAAC CGCGAGCGGG GAATCGGGGA GGCGATCGCC
TCCTGGACGG CGCACGGGCA GCACGTCCTG ACCTCCGAGG GCGGGATCGA CGTCCCGCTC
GATCCCAGCC TGCCCTTCCC CTTCGCCGTG GCCGCCGGGC GGCTCGGCGC GGCCGGCGCC
GAGACCCCGC TGCGGGACGA GGTCGTCGAC ACGCTGGGAC TGGCGAACCC GCTCGGCGCG
CACCTGACCG TCACCACCCC CGGCCGGCCC GGGCACGAGA AGGAGCTGCC GTGGGCGTGG
ATCCTCGCCG ACTACGGCGA TCCGGCGGTC GTGGACACTC AAGAAGTTCT CAAGGGGGTT
TCCCCGCAGC AGGTCGCCGC CGCGCGGCAC GCCATGGGCT GCGGCGCCCT GAAGGAACTG
CTGGATTCGA CCAGACAGCC CATGACCTTC GGGCGGTTCT GGAGCAACCT CGCCGGCGCG
GCGAGCCGGA CGGCGCTGGT CGTCCCGGCA GATCCGTTCG CGGCGGAGAA GAAGTTCTGC
CGGTGA
 
Protein sequence
MGNQGTDTGV PEGIGTDVSD AADVSDAVHE PAASGDPGSV GQQGTAAPTA GGETIPRQRR 
PLLDAVHPVR AVTAFHRRHH PVTLVAIAAT TLAYAALAYH RRWIADDGMI AVRTVRQILA
GHGPVYSPYE RAETDTSTLW TLLLTIGGGV TGVDVARVAV LTGLLCAVGG VVSALFATAR
LHARLSAKPR RPLLPAGALL LLGVSPFWDF ATSGLETGLE ILWLGLCWLA LVAWCAETPD
TKRQYLVALL IGLAPLVRPE FALMEAVFAV AAWLLIRPGK RRTLLLFVTA QAFPLITEIF
RAGYYGELVP LPALAKSADG SQWNRGWRYV EETLKGYFVW IPLAILLAAA IAHLMNKSAL
KSRTTTILLA TPVTAGLLLG LYVVKVGGDF MHARMVLPVL FLLVLPVLVV PVTAVLVPAV
TATAVWAAYC GSTYSVHFYD QKHAIAEDER VGYQQWTGRP NPETSAAYTN RERGIGEAIA
SWTAHGQHVL TSEGGIDVPL DPSLPFPFAV AAGRLGAAGA ETPLRDEVVD TLGLANPLGA
HLTVTTPGRP GHEKELPWAW ILADYGDPAV VDTQEVLKGV SPQQVAAARH AMGCGALKEL
LDSTRQPMTF GRFWSNLAGA ASRTALVVPA DPFAAEKKFC R