Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1172 |
Symbol | |
ID | 8332507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1320955 |
End bp | 1321779 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954319 |
Product | hypothetical protein |
Protein accession | YP_003111938 |
Protein GI | 256390374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.743976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAC CCAGCATGCA CTCGATCGTC GGGAGTCACG ACCTCCTGTT CGTCACCCTC GACACCCTCC GCCACGACGT CGCCGTCGAA GAACTCGCCG CCGGCCGCCT CCCGAACCTC GCCCGAGTCC TTCCCGACGG CTGGGAGCGG CGGCACACGC CGGGCTCGTT CACCTTCGCC GCGCACTCCG CGTTCTTCGC AGGCTTCCTG CCGACGCCGG ACACGCCAGG GCGGCATCCG CGGTTGTTCG CCGCACGCTT CGGCGGCAGC GAGACCACAG CCGAGGACAC CTGGGTGTTC GACGAGCCGG ATCTGGTCGC CGGGCTGCGC AAAGCCGGGT ACCGGACCGT CTGCGTCGGG GGAGTGGGGT TCTTCAATCC GGAGAGCCGG CTCGGGCAGG TGCTGCCGGG TTACTTCGAC GAGTCCCACT GGTCGGCGGC GACCGGCGTG ACCGACCCGG ATTCTTTCGC CCACCAGGTC GGCGTCGTGG AGCAGGTGGT CGCGGCGCAG CCGGAGGAGC AGCCGCTGTT CCTGTTCGTG AACGTCCCGG CTCTGCACCA GCCGAACTGG TTCTATCTCG ACGGCGCGAC CAAGGACGCC GGTGACACGC GCGCGTCGCA CGCGGCGGCT TTGCGTTACG TGGACACGCA CATCGGGCGG CTGTTCACGC TCATGGCGGC GCGCCGCGCG TGCTTCACCA TCGTCTGCTC CGACCACGGA ACCGCCTACG GCGAGGACGG TCACGTCGGG CATCGCATCG GCCATGACGT GGTCTGGACG GTGCCCTATG CCGATTTCGT GCTGCCGAAG GGATATGAGG GCTGA
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Protein sequence | MTRPSMHSIV GSHDLLFVTL DTLRHDVAVE ELAAGRLPNL ARVLPDGWER RHTPGSFTFA AHSAFFAGFL PTPDTPGRHP RLFAARFGGS ETTAEDTWVF DEPDLVAGLR KAGYRTVCVG GVGFFNPESR LGQVLPGYFD ESHWSAATGV TDPDSFAHQV GVVEQVVAAQ PEEQPLFLFV NVPALHQPNW FYLDGATKDA GDTRASHAAA LRYVDTHIGR LFTLMAARRA CFTIVCSDHG TAYGEDGHVG HRIGHDVVWT VPYADFVLPK GYEG
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