Gene Caci_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1172 
Symbol 
ID8332507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1320955 
End bp1321779 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID644954319 
Producthypothetical protein 
Protein accessionYP_003111938 
Protein GI256390374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.743976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC CCAGCATGCA CTCGATCGTC GGGAGTCACG ACCTCCTGTT CGTCACCCTC 
GACACCCTCC GCCACGACGT CGCCGTCGAA GAACTCGCCG CCGGCCGCCT CCCGAACCTC
GCCCGAGTCC TTCCCGACGG CTGGGAGCGG CGGCACACGC CGGGCTCGTT CACCTTCGCC
GCGCACTCCG CGTTCTTCGC AGGCTTCCTG CCGACGCCGG ACACGCCAGG GCGGCATCCG
CGGTTGTTCG CCGCACGCTT CGGCGGCAGC GAGACCACAG CCGAGGACAC CTGGGTGTTC
GACGAGCCGG ATCTGGTCGC CGGGCTGCGC AAAGCCGGGT ACCGGACCGT CTGCGTCGGG
GGAGTGGGGT TCTTCAATCC GGAGAGCCGG CTCGGGCAGG TGCTGCCGGG TTACTTCGAC
GAGTCCCACT GGTCGGCGGC GACCGGCGTG ACCGACCCGG ATTCTTTCGC CCACCAGGTC
GGCGTCGTGG AGCAGGTGGT CGCGGCGCAG CCGGAGGAGC AGCCGCTGTT CCTGTTCGTG
AACGTCCCGG CTCTGCACCA GCCGAACTGG TTCTATCTCG ACGGCGCGAC CAAGGACGCC
GGTGACACGC GCGCGTCGCA CGCGGCGGCT TTGCGTTACG TGGACACGCA CATCGGGCGG
CTGTTCACGC TCATGGCGGC GCGCCGCGCG TGCTTCACCA TCGTCTGCTC CGACCACGGA
ACCGCCTACG GCGAGGACGG TCACGTCGGG CATCGCATCG GCCATGACGT GGTCTGGACG
GTGCCCTATG CCGATTTCGT GCTGCCGAAG GGATATGAGG GCTGA
 
Protein sequence
MTRPSMHSIV GSHDLLFVTL DTLRHDVAVE ELAAGRLPNL ARVLPDGWER RHTPGSFTFA 
AHSAFFAGFL PTPDTPGRHP RLFAARFGGS ETTAEDTWVF DEPDLVAGLR KAGYRTVCVG
GVGFFNPESR LGQVLPGYFD ESHWSAATGV TDPDSFAHQV GVVEQVVAAQ PEEQPLFLFV
NVPALHQPNW FYLDGATKDA GDTRASHAAA LRYVDTHIGR LFTLMAARRA CFTIVCSDHG
TAYGEDGHVG HRIGHDVVWT VPYADFVLPK GYEG