Gene Caci_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1125 
Symbol 
ID8332460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1270118 
End bp1270873 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID644954273 
Productnuclear export factor GLE1 
Protein accessionYP_003111892 
Protein GI256390328 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC TCTCTCGCGG AGCGGCGCTG ACCGGTGCCG TCCTCACCGT CTTGGCGATC 
GCCGGTCCGG CGTCCGCGCA CGTCACCATC AGCCCGAACA CGACCGCCAA GGGCGGCAGC
GACATCGAGC TGACCTTCCG CGTCCCCAAC GAGGAGGCGC AGGCGACCAC CACTCAGGTC
GAGGTCGACT TCCCGACCGA CAAGCCGATC ACCGGCGTGC TGCCGGAGCC CACGCCGGGG
TGGACGGTCA AGGTCGACAA CGTCACGCTC GCCACGCCGA TCAAGACCGA CGACGGCACG
GTCACGCAGG TCGTGCAACG CATCACTTGG AGCGGCGGAC AGCTCGCGCC GGGGCAATAC
CAGGGCTTCC GGGTGATGCT CGGCAGCGTG CCGGATGACG CCGACAGCCT TACTTTCAAG
GCCTTGCAGA CCTACTCCAA CGGCGATGTG GTCCGCTGGA TCGACGTCCA GCAGTCCGGG
CAGCCGGAGC CCGACCACCC GGCGCCGGTG CTCACGTTGG GTGCGGCGGC TCCCGACGGC
GATGCCTCCT CCGCGCCGTC CAGCCCGCAG GTGACGGCTA CGGCGTCGAG CGCCCCGAAC
GCCGGCGCCG GCACCCCGGC CGCGTCGGCC AAGAGCAGCG ACTCGACGGC GCGCGGTCTC
GGTATCGCCG GGATCGTCAT CGGCGTGCTC GGCCTCGGGG CGGGTGCGTT CGGCGTTGGG
GCGGCGCGGC GCAAGGGAGC CGGGACGTCG CAATGA
 
Protein sequence
MSKLSRGAAL TGAVLTVLAI AGPASAHVTI SPNTTAKGGS DIELTFRVPN EEAQATTTQV 
EVDFPTDKPI TGVLPEPTPG WTVKVDNVTL ATPIKTDDGT VTQVVQRITW SGGQLAPGQY
QGFRVMLGSV PDDADSLTFK ALQTYSNGDV VRWIDVQQSG QPEPDHPAPV LTLGAAAPDG
DASSAPSSPQ VTATASSAPN AGAGTPAASA KSSDSTARGL GIAGIVIGVL GLGAGAFGVG
AARRKGAGTS Q