Gene Caci_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1099 
Symbol 
ID8332434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1242593 
End bp1243366 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content73% 
IMG OID644954247 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003111866 
Protein GI256390302 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.544817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAGT CGGTGCAGCG TGCGGTGCGT GTCCTGCGGG AGCTCGCCGC CGGTGGTCCG 
CGGCTGGGCG TGACCGAGCT GGCCGAGCGT GTCGGCGTCG CCAAGCCCAC CGTGCATGCC
CTGCTGCGCA CGCTCGAGGG CGAGGGCCTG GTGGTCCAGG ACTCCGAGAC CGGCCGCTAC
CAGTTGGGCC CGGGACTGCT GCTGCTCGGC AACGCCTATC TGGAGACGCA GGAGCTGCGC
GCACGCTCGC TGAGCTGGGC CGACACCCTC GCCACCCGGG CTGACGAGGC CGTCTGGGTG
ACGGTGCTGA CCGGCGATCA CGTCTTCGTC GTGCACCACG CGTTCCGTCC CGAAGGTGTC
GTCCAGATCC TCGAGGTCGG CGCCAGCATC CCCTGGAACA CCTGCGCGCT CGGCAAGGCG
ACCGTCGCGT TCCTGCCGCC CGAGCAGCGC AAGGCTTTGC TGGACGGCGA CCTGCCGGCG
CTCACCGGCG CCAGCGTCAC CGACCCCGCC GCGCTGTCCC GCCAGTTGGA CGAGGTCGGG
CGCACCGGCC ACGCGCTGGA GAACCAGGAA TCGGCGCTGG GCGACGCCGG GATCGCCGCG
CCGGTCTTCG ACCGCACCGG GGTCGCCGGA GCCATCGGCA TCATCGGCCC GGTCGAGCGC
GTCCTGGACG ACAGCGCACG TCAGGACCAT ATCGTCGCCG TACGCGAGGT CGCCCGGCAG
ATCTCGCGGG AGCTCGGCGC GGGACGTGGG AGCGCGCGGG TCCCGCGTCC CTGA
 
Protein sequence
MVQSVQRAVR VLRELAAGGP RLGVTELAER VGVAKPTVHA LLRTLEGEGL VVQDSETGRY 
QLGPGLLLLG NAYLETQELR ARSLSWADTL ATRADEAVWV TVLTGDHVFV VHHAFRPEGV
VQILEVGASI PWNTCALGKA TVAFLPPEQR KALLDGDLPA LTGASVTDPA ALSRQLDEVG
RTGHALENQE SALGDAGIAA PVFDRTGVAG AIGIIGPVER VLDDSARQDH IVAVREVARQ
ISRELGAGRG SARVPRP