Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1099 |
Symbol | |
ID | 8332434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1242593 |
End bp | 1243366 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954247 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003111866 |
Protein GI | 256390302 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.544817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCAGT CGGTGCAGCG TGCGGTGCGT GTCCTGCGGG AGCTCGCCGC CGGTGGTCCG CGGCTGGGCG TGACCGAGCT GGCCGAGCGT GTCGGCGTCG CCAAGCCCAC CGTGCATGCC CTGCTGCGCA CGCTCGAGGG CGAGGGCCTG GTGGTCCAGG ACTCCGAGAC CGGCCGCTAC CAGTTGGGCC CGGGACTGCT GCTGCTCGGC AACGCCTATC TGGAGACGCA GGAGCTGCGC GCACGCTCGC TGAGCTGGGC CGACACCCTC GCCACCCGGG CTGACGAGGC CGTCTGGGTG ACGGTGCTGA CCGGCGATCA CGTCTTCGTC GTGCACCACG CGTTCCGTCC CGAAGGTGTC GTCCAGATCC TCGAGGTCGG CGCCAGCATC CCCTGGAACA CCTGCGCGCT CGGCAAGGCG ACCGTCGCGT TCCTGCCGCC CGAGCAGCGC AAGGCTTTGC TGGACGGCGA CCTGCCGGCG CTCACCGGCG CCAGCGTCAC CGACCCCGCC GCGCTGTCCC GCCAGTTGGA CGAGGTCGGG CGCACCGGCC ACGCGCTGGA GAACCAGGAA TCGGCGCTGG GCGACGCCGG GATCGCCGCG CCGGTCTTCG ACCGCACCGG GGTCGCCGGA GCCATCGGCA TCATCGGCCC GGTCGAGCGC GTCCTGGACG ACAGCGCACG TCAGGACCAT ATCGTCGCCG TACGCGAGGT CGCCCGGCAG ATCTCGCGGG AGCTCGGCGC GGGACGTGGG AGCGCGCGGG TCCCGCGTCC CTGA
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Protein sequence | MVQSVQRAVR VLRELAAGGP RLGVTELAER VGVAKPTVHA LLRTLEGEGL VVQDSETGRY QLGPGLLLLG NAYLETQELR ARSLSWADTL ATRADEAVWV TVLTGDHVFV VHHAFRPEGV VQILEVGASI PWNTCALGKA TVAFLPPEQR KALLDGDLPA LTGASVTDPA ALSRQLDEVG RTGHALENQE SALGDAGIAA PVFDRTGVAG AIGIIGPVER VLDDSARQDH IVAVREVARQ ISRELGAGRG SARVPRP
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