Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1067 |
Symbol | |
ID | 8332402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1210737 |
End bp | 1211354 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644954215 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003111834 |
Protein GI | 256390270 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.506731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCACTG TTTGTGCATC GGGGATGTTG AAAGTGATGA TGTGTCAATG CGCCGAGGAG TCGGCCGCGA CCTCTTTGGA TGCCCGCGAC TATCGGAATC TGCTGTCGGT ATTGGCGGAT GCGTCCGGGT TCTCCGATTA TCGATTCTTC GAACAGCTGG GGGAGTCGCT CTCCCGTCAC CTCGGGTGGA CCGATGCCGT GGTGCTGGAC CTCGCCGATG TCAGCCCTCT GATCAGCGAG AACGGCGTCA CGAAGCTGAG CGACCTGTTT GGGCGCATTG ACGCCGGAGC GGCGGGTTCG GCCCTCATCC GCCGCAACGC CCCGGACGAA GCGAGCATCG ACGAGCGTGA GATAGCGCTG ATGGAACTTC TGGCCCAGTA TCTGTCCCCG CGCCTGCGCG AGTATTTCGT GCGCTCGAAG GAAGTCCGCG ACGGCAGCTC ACTGACCGAT CGCGAAGCAC AGGTGGTACG GCTCGTCGCG CAAGGGATGA GCAACCGCCT CATCGCCGCT GAGCTTCATA TCCGCGTCGA CACCGTCAAG AAGCACGTGA TGTCCGCGAT GCAGAAGACG GGCGCCGGCA ATCGGACTCA GCTGGCGCTT ATCCATCTGC GGAGTTGA
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Protein sequence | MVTVCASGML KVMMCQCAEE SAATSLDARD YRNLLSVLAD ASGFSDYRFF EQLGESLSRH LGWTDAVVLD LADVSPLISE NGVTKLSDLF GRIDAGAAGS ALIRRNAPDE ASIDEREIAL MELLAQYLSP RLREYFVRSK EVRDGSSLTD REAQVVRLVA QGMSNRLIAA ELHIRVDTVK KHVMSAMQKT GAGNRTQLAL IHLRS
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