| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1060 |
|---|
| Symbol | |
|---|
| ID | 8332395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1204494 |
|---|
| End bp | 1205948 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954208 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003111827 |
|---|
| Protein GI | 256390263 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.497874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTG GTCTCGCCCT GGCCGTCGGC GGTGGATGCG GGGCCGCGGT GATGTGGGCG
ATGCGCGGTG TGGGGTCCGC GCATCCCGAG ATCGAGATCG CCGTGGTCGC CGCTTTCGGT
CTGATCGCGT TGGTCCTGGC CTTCCTGATG ATGAATCCCG CGCACGACGG GCATCGCACG
CCGCGTCACC GCGAGCGCGA GATGGAAGCC CTGCGCGCTC GCCTCGAGGC GGCGTGGACG
GCGCACCTGG GCCAGCTTCT GGTCGCCGCC GCGGAACGCC TCGCCCGCGA CCGGCCGGAG
ATCGAGGTCC AAGCCGTGGA GAGCGGGTTG GCCACCGGAG GCATCGCCGG GATCGAGGCC
GCGATCACGG CACTGGTCGC GCCTGCCGCC TACCCGTCCT CGCCGGAGGC CTCGCAGATC
CAAGCGGACG CGTCGATGAC GATCGCCCGC CGCGTCCTGG CTCTGATCGT CCGGGTGCTG
CGGCAACTCG ACGCGCTCGA GCGCGAAACC GAGGATCCGG CGGCCTTGAA GTCCTTGTTC
GTCATCGACG AGCAGGTGAC GCGCATCCGC CGGGCCGTCG AGACGCTGGC GGTGTTCGGC
GGCGTCGCCC CGCGCACGGC CACCCGGCCG GTCGCCGTGA ACACGGTGCT GCGCCAGGCC
GTCGCCGAGA TCGAGGACTA CCGGCGGGTG CAGATCCTGC CGCCGGCGCT GGGCCGGGTC
CACGGCGTCG CCGCGGCCGA CATCATCCAC CTGATCGCCG AGCTGGTCGA GAACGCCGCG
AAGTTCTCGC GGCCCGGAAC CGAGGTGACG GTTCGCGTCC AGGAGGTCTC CGCCGGCATC
GCGATCGACA TCGACGACCG CGGACTGGGC ATGGACCGCC AAGAGTGCGA GCGCGTGTGC
GCGCTGCTGG CCGGGCTCGA CCCGGAGCAG GCCGCGCAGC GGCTGCGCGA CGGGCAACTC
GGCTACCTGG CGTCCGCGCG CTTCGCCGCC CGCCACGGCA TCGCGGTGCG GGTGTCCTCG
AATGTCGTCG GCGGTCTGCA CGCCCTGGTT CTGCTGCCGC ACGCGGTCCT GGAAGCCGGT
CCGGTCGTCG CCGAACCCGT CGTCGAGGTT CCCCGGGAGT ACCGGACCCC GGTGGCCGTC
ATCCCTGAGG CGCGCTCGGC GGTTCTGACT CCCGCCGCGC ACCGGGCGGT CGCGCAGAAC
GGCAGCGCGC AGCCGGCCCG GACCATCATT CCCGGCGGGC GCCCGCCGCT GCCCCGGCGC
GAGGGCAGCT ACCTGCTGCC GCAGCCCGCC ACCCCCGAGA CTGCCTCGCC CGAGTCCGCA
CGGGGGGACT CGGGCGAGGC TGCGTTCACC CCCGGTCTGC TGGCCGGCTA CCGGAACGGC
TACCAGTCCG GCGTCGACAC CTGGACCGGC GAGGACGGCA CGAACGAGTA CGAGCCGCCC
CGAGAGGACA GGTGA
|
|---|
| Protein sequence | MAVGLALAVG GGCGAAVMWA MRGVGSAHPE IEIAVVAAFG LIALVLAFLM MNPAHDGHRT
PRHREREMEA LRARLEAAWT AHLGQLLVAA AERLARDRPE IEVQAVESGL ATGGIAGIEA
AITALVAPAA YPSSPEASQI QADASMTIAR RVLALIVRVL RQLDALERET EDPAALKSLF
VIDEQVTRIR RAVETLAVFG GVAPRTATRP VAVNTVLRQA VAEIEDYRRV QILPPALGRV
HGVAAADIIH LIAELVENAA KFSRPGTEVT VRVQEVSAGI AIDIDDRGLG MDRQECERVC
ALLAGLDPEQ AAQRLRDGQL GYLASARFAA RHGIAVRVSS NVVGGLHALV LLPHAVLEAG
PVVAEPVVEV PREYRTPVAV IPEARSAVLT PAAHRAVAQN GSAQPARTII PGGRPPLPRR
EGSYLLPQPA TPETASPESA RGDSGEAAFT PGLLAGYRNG YQSGVDTWTG EDGTNEYEPP
REDR
|
|---|
| |