Gene Caci_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1023 
Symbol 
ID8332357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1161823 
End bp1162287 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID644954172 
Productthioesterase superfamily protein 
Protein accessionYP_003111792 
Protein GI256390228 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.42478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0264332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTGA CCACCCCCCA ACCCCCAGCA CCCCTAACCC AGGCCCAAGC CACCGAAATC 
CTCGCCCAAA ACTTCGCCCC CTGGATCCAA TCCCTCAACC TCACCGTCGA GGAAACAACC
CCCACCACCA CAACCCTCCG CCTCCCCTGG CACCCAACCC TCGCCCGCCA AGGCGGCACC
CTCTGCGGCC AAGCCCTCAT GGCAGCAGCA GACACAGCAA CAGTCATCGC CATCAGCGCA
GCCCGAGGCA CCTACTGCCC CATGACCACC GTCCAGCAAA ACACCACATT CCAACGCCCA
ATCCACCAAT CGGACGTCCT CATCACAGCC CACATCACCA AACTAGGCCG CACCCTAGCC
TTCACCGACA TCACCATGAC CCCAGCCCCC GACCCAACCC ACCCCCAAAC CCCACCACCC
CCACCAGCAG CCCAAGCAAC AACCATCTAC GCCCTCCTAA CCTGA
 
Protein sequence
MNVTTPQPPA PLTQAQATEI LAQNFAPWIQ SLNLTVEETT PTTTTLRLPW HPTLARQGGT 
LCGQALMAAA DTATVIAISA ARGTYCPMTT VQQNTTFQRP IHQSDVLITA HITKLGRTLA
FTDITMTPAP DPTHPQTPPP PPAAQATTIY ALLT