| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1018 |
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| Symbol | gabD2 |
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| ID | 8332352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1157730 |
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| End bp | 1159382 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954167 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003111787 |
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| Protein GI | 256390223 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0148351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG ACACCATCGA TCCGGGCAAC GGCATATCCG AGGACGCCCA GGACGTTCCG
GCCGGCGCCG GTCCCCAGGA TGCGACCCGC CTCGACAGCA TCCACACCCG ACTGTCGGCC
GACCTGGTCG AGCGGCTCAT CGGGAAAGTG GCCATCCACG GCGCGGTGGG CGGTCGGACG
CAGTCCTACA GTCCGCTCAC CGGCGAGCTC ATCGCCGACT TCCCCGCCAG CGCTCCCCAG
GACGTCCGCG CCGCCTACGC CAAGGCCCGC GCCGCGCAGC TGGAGTGGGG CGCCACGAGC
CTGGCGCACC GGACCGGCTT CGCCCGCCGC ATGCACGACC TGCTGCTGGA GCGCTCCGAC
CAGCTGCTCG ACCTGGTGCA GATCGAGACC GGCAAGGCTC GCAAGCACGC ACTGGACGAG
ATCCTCTCTG CCGCCGCAGC TACTCGGCAC TACGCGTACG CCTCGCGCGG CTACATCCGC
AGCAAGCGCC GTCGCGGCGT CCTTCCGGTC CTGACGAAGG TCACCGAGAA CCGCATCCCC
AAGGGCGTCG TCGGCATCAT CACGCCGTGG AACTATCCGC TGGCGCTCGC CGTCTCCGAC
GTCATACCGG CGCTCATCGC GGGCAACGCG GTAGTGCACA AGCCGGACAC CCAGACCGCG
CTCACAGGTC TGCGGCTGCG CGAACTGGCT GTTCAGGCCG GGCTGCCGGA GGACCTGTGG
CAAGTGGTGG TCGGTGACGG ACCGGTCGTC GGTCCCGCAG TCGTCGCAGA CGCCGACTAC
GTCGCCTTCA CCGGTTCCAC TGCTACGGGT CGCACTGTCG CGCAGGCCGC TGCCTCCCGA
CTGATCGGCT GCTCGCTGGA ACTCGGCGGC AAGAACGCCA TGCTCGTGCT CGACGACGCG
GACATAGAGA AGTCGGTGTC CGGTGCGGTG CGTGGCTGTT TCTCCTCCGC GGGACAGCTG
TGCATATCTA TAGAGCGCAT ATACGTGCAC TACACCAAGT ACGACGAGTT CCTGTCGCGG
TTCCTTACCG AGGTGCGCGC TATGCGCCTG GGATCCGGGC TCGACTACTC CGCGGACATG
GGTTCGCTGA CGAACACCAA GCAGCTCGAG AACGTGACGC TGCATGTGGA AGACGCCAAG
GCGAAGGGCG CGAAGGTGCT CTCCGGCGGG CGGCGCCGTG CGGAGATCGG TCCGCTGTTC
TATGAGCCGA CAGTGCTCGG AGACGTCAAG AACACCATGC GTGTCTACGG CGAGGAGACG
TTCGGGCCGG TCGTGTCCGT GTACTCCTTC AAGAACGAGG GCGAAGCCAT AGCGGACGCG
AACAACACGC CGTATGGCCT GAACGCCTCC ATGTGGACCC GCGACCACAA GCGCGCTCGC
GAGATCGCCC GCCAGCTGCA CGCCGGCACG GTGAACGTCA ACGAGGCCTA TGGCGCGGCC
TGGGGCTCGG TCGCCTCGCC GATGGGCGGC ATGGGCCAGT CCGGGCTCGG GCGCCGCCAC
GGCGCGGAGG GCATCCTGCG CTTCACCGAG GCCCAGACCG CGGCCCGCCA GCGCCTGCTG
CCGATCGCTC CCTGGTTCGG GATGTCGGAT CAGAAGTGGG GCGACCTGAT GCTGCGCTCG
CTGAAGCTTC TCAAGGTCCT GCGGATGAAG TAG
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| Protein sequence | MTADTIDPGN GISEDAQDVP AGAGPQDATR LDSIHTRLSA DLVERLIGKV AIHGAVGGRT
QSYSPLTGEL IADFPASAPQ DVRAAYAKAR AAQLEWGATS LAHRTGFARR MHDLLLERSD
QLLDLVQIET GKARKHALDE ILSAAAATRH YAYASRGYIR SKRRRGVLPV LTKVTENRIP
KGVVGIITPW NYPLALAVSD VIPALIAGNA VVHKPDTQTA LTGLRLRELA VQAGLPEDLW
QVVVGDGPVV GPAVVADADY VAFTGSTATG RTVAQAAASR LIGCSLELGG KNAMLVLDDA
DIEKSVSGAV RGCFSSAGQL CISIERIYVH YTKYDEFLSR FLTEVRAMRL GSGLDYSADM
GSLTNTKQLE NVTLHVEDAK AKGAKVLSGG RRRAEIGPLF YEPTVLGDVK NTMRVYGEET
FGPVVSVYSF KNEGEAIADA NNTPYGLNAS MWTRDHKRAR EIARQLHAGT VNVNEAYGAA
WGSVASPMGG MGQSGLGRRH GAEGILRFTE AQTAARQRLL PIAPWFGMSD QKWGDLMLRS
LKLLKVLRMK
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