Gene Caci_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1007 
Symbol 
ID8332341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1146477 
End bp1146773 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content67% 
IMG OID644954156 
Productchaperonin Cpn10 
Protein accessionYP_003111776 
Protein GI256390212 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.103756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACCG TTGCCATCAA GCCGCTCGAG GACCGCGTCG TCGTCAAGCC GCTCGACGCC 
GAGCAGACCA CCGCTTCCGG CCTCGTCATC CCGGACACCG CCAAGGAGAA GCCGCAGGAG
GGCGTCGTCC TGGCCGTGGG CCCCGGCCGC TGGGAAGACG GCAAGCGCGT CGAGCTCGAC
GTCAAGGAGG GCGACATCGT CCTCTACAGC AAGTACGGCG GCACCGAGGT CAAGTACAAC
AACGAGGAGT ACCTCGTCCT GTCGGCGCGC GACCTGCTCG CGATCGTCAA CAAGTAG
 
Protein sequence
MATVAIKPLE DRVVVKPLDA EQTTASGLVI PDTAKEKPQE GVVLAVGPGR WEDGKRVELD 
VKEGDIVLYS KYGGTEVKYN NEEYLVLSAR DLLAIVNK