| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1004 |
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| Symbol | |
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| ID | 8332338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1144384 |
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| End bp | 1145400 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644954153 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_003111773 |
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| Protein GI | 256390209 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.794794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.121632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTACG AGGACCAGGA CCTCCCCATA GGCTGCGGCT GCGAAGACCA CGACCTGACA
CCGACACCGG ACGCGAGCCC GGCGCACGCC TCTCGACGAC GCTTTCTCCG TTCCGCCGCA
GGGCTCGCCG TAGCCGCGCC GGCCATGCTG GCCGCGGCTT GCGGCTCCGG CAGTTCATCC
TCGGGAGCGA AGCAGAACGC CGGAGCCGGC GTGACTCCCA CCTCGGGCGC CTCCACGTCG
GGCGCGCCCT CGCAGTCCTC CAGCTCGCCG TCCGGCGCCG CGAGTAGCAG CGGCAACGGT
CTCCCCGGTC CCGAGACCGC GGACGCGGCA CTCCTGGCGC ACCGCTACGA CGGACTCAAG
CCCTTCGCCC CGGCTCCGCC GCCGCCCGCG ACCAAGCCGG TGAACACGAA CGTCGACCTC
CCCCCGGTCA TCAGCCACAT CCCGACGGAC CAGAAGATCT GCTTCCTCAC CATCGACGAC
GGCGCCGAGA AGGACCCGGC CTTCATCCAG ATGGTCAAGG ACTTCCGCAT CCCCATCACG
ATGTTCCTGG CCGACATGTT CATCCAGGAC GACTACTCGT ACTTCACAAA GCTCCGCGAC
ACCGGCTACT GCACCATCCA GAACCACACC CTGCACCACC CGGACATGAC GACCCTGAGC
GCCGAGCGCC AGCTGGCAGA GGTCACCGGC CAGCAGCAGA AGCTCGTCAA GAACTACAAC
ACCCACCCCT ACCTGTTCCG CGCGCCCTTC GGGAACTCCA ACAAGGCGAC GCAGCAAGCC
TGTAAGCAGA ACGGCCTCAA GGCCATCTGC TACTGGCGCG CGACGTTCCA GAAGCAGGGC
TTCCAGTGGC AGGCGGCCGA CAAGAAGCTC CGCCCCGGCG ACATCCTGCT GGCGCACTTC
CGCGGTCCCA AGGCCAACGG CAAGGGCTGG CCGGAGATGC ACGAGCTGAT GACCAACCTG
TTCCGCATCG TGCAGGAGCA GGGGTACACG TTCGCTCGGC TGGAGGACTA CGTCTGA
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| Protein sequence | MTYEDQDLPI GCGCEDHDLT PTPDASPAHA SRRRFLRSAA GLAVAAPAML AAACGSGSSS
SGAKQNAGAG VTPTSGASTS GAPSQSSSSP SGAASSSGNG LPGPETADAA LLAHRYDGLK
PFAPAPPPPA TKPVNTNVDL PPVISHIPTD QKICFLTIDD GAEKDPAFIQ MVKDFRIPIT
MFLADMFIQD DYSYFTKLRD TGYCTIQNHT LHHPDMTTLS AERQLAEVTG QQQKLVKNYN
THPYLFRAPF GNSNKATQQA CKQNGLKAIC YWRATFQKQG FQWQAADKKL RPGDILLAHF
RGPKANGKGW PEMHELMTNL FRIVQEQGYT FARLEDYV
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