Gene Caci_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0998 
Symbol 
ID8332332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1140484 
End bp1141032 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content74% 
IMG OID644954147 
Productprotein of unknown function UPF0079 
Protein accessionYP_003111767 
Protein GI256390203 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.146802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTGA TCCCTGACCA AGCCGGACCC GGGCTGCCCG GACCCGTCCT GGAGACCCCG 
GTCGCGACCG CGGGCGCCAT GAAAGACCTC GGCCGCCGCC TCGGCGCCCG GCTGCGCCGC
GGCGACCTCG TGGTCCTGAC CGGCGATCTG GGAGCCGGCA AAACGACCTT CACCCAGGGC
CTCGGCGAAG GCCTCGGCGT GCGCGGACCC GTCACCTCGC CGACCTTCGT CATCGCCCGG
GTCCACCCGC CGGCCGCCGG GGGCGGCGTC CCGCTGGTCC ACGTCGACGC CTACCGGCTC
GGCTCCCTGG ACGAGCTCGA CGACCTGGAC CTGGACGCCT CGGTCGAGCA GTCGGTGACC
GTGGTCGAGT GGGGCGAGGG CAAGGCCGAG GTCCTCACCG ACGACCGCCT GGACATCGTG
ATCTCCCGGG AGTACGCCGA GGAGCTCGAC GATCCCGGCG ACTCCGAGGT GCGGTGGGTC
GTGGTGCGCG GCATCGGGGA GCGCTGGACG GACCGCGATC TGGCCGCCCT CGAAGACGCG
GCCGGCTGA
 
Protein sequence
MSVIPDQAGP GLPGPVLETP VATAGAMKDL GRRLGARLRR GDLVVLTGDL GAGKTTFTQG 
LGEGLGVRGP VTSPTFVIAR VHPPAAGGGV PLVHVDAYRL GSLDELDDLD LDASVEQSVT
VVEWGEGKAE VLTDDRLDIV ISREYAEELD DPGDSEVRWV VVRGIGERWT DRDLAALEDA
AG