Gene Caci_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0916 
Symbol 
ID8332250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1063458 
End bp1063841 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content67% 
IMG OID644954069 
Productribosomal protein L7/L12 
Protein accessionYP_003111689 
Protein GI256390125 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.599285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.231708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC TCAGCAACGA CGAGCTGCTC GAGGCTTTCA AGGAGATGAC GCTGATCGAG 
CTCTCCGAGT TCGTGAAGCA GTTCGAGGAC GTCTTCGACG TCAAGGCGGC CGCCCCGGTC
GCCGTCGCCG GCCCGGCCGG CCCGGCCGCG ACCGCCGAGG CGGCCGTGGA GCAGGACGAG
TTCGACGTCA TCCTCGAGGG TGCCGGCGAG AAGAAGATCC AGGTCATCAA GGTCGTGCGC
GAGCTGACCT CGCTGGGTCT GAAGGAGGCC AAGGACCTCG TCGACGGCGC TCCGAAGCCG
GTGCTGGAGA AGGCCACCAA GGAGGCCGCC GAGAAGGCCA AGGCGTCTCT GGAAGAGGCC
GGCGCTTCGG TGACCGTCAA GTAG
 
Protein sequence
MAKLSNDELL EAFKEMTLIE LSEFVKQFED VFDVKAAAPV AVAGPAGPAA TAEAAVEQDE 
FDVILEGAGE KKIQVIKVVR ELTSLGLKEA KDLVDGAPKP VLEKATKEAA EKAKASLEEA
GASVTVK