Gene Caci_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0896 
Symbol 
ID8332227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1043200 
End bp1043826 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID644954046 
ProductNUDIX hydrolase 
Protein accessionYP_003111669 
Protein GI256390105 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.22169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.286804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACC CTGAGCCGAC GCCGTCTCAC GCCACACCCG AAGCCACTTC CGGGGACACC 
TTGCGCGACC TGCCGCACCC GGTCCGCAGC CGCAGCCAGT GGACCGTCCA CGGCGAGCGC
CCGGTGTATG AGAACCCGTG GATCGACGTC CTGCTGGCCG AGGTCGAACT CGCCGACGGC
ACCCGCTTCG AGCACCACGT CGTCCGCACC CGCAGCGCCG CCGGCTGCGT GGTGACCAGG
ACCGAAGCCG GCCGCGAAGA GGTGCTGCTG ATCTGGCGGC ACCGCTTCGC GATCGACAAG
TGGGTCTGGG AGATCCCCTC CGGCTTGATC GAGGAGGGCG AGGACCCGGC GGAGGCCGCA
CGCCGCGAGG TCGAGGAGGA GACCGGCTGG CGGGTGAGCG ACGTCACACC GCTGCTCACC
TTTCACCCGG TCGGCGGGAT GCTGCGGACG CAGTACCGGT TGTTCCGCGC GATCGGTGCC
GAACACATCG GAGAGCCGAC GGAGCAGAAC GAAGCCGAGA AAGTCGCCTG GATTCCGCTG
GACGAGGTAC TCGGACTCAT CGACGCCGGA CAGATCGCGA CATCCTCCTC ACTCGTCGGA
CTGCTGCGAG TCCTCACGCG AAGCTGA
 
Protein sequence
MSDPEPTPSH ATPEATSGDT LRDLPHPVRS RSQWTVHGER PVYENPWIDV LLAEVELADG 
TRFEHHVVRT RSAAGCVVTR TEAGREEVLL IWRHRFAIDK WVWEIPSGLI EEGEDPAEAA
RREVEEETGW RVSDVTPLLT FHPVGGMLRT QYRLFRAIGA EHIGEPTEQN EAEKVAWIPL
DEVLGLIDAG QIATSSSLVG LLRVLTRS