Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0896 |
Symbol | |
ID | 8332227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1043200 |
End bp | 1043826 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644954046 |
Product | NUDIX hydrolase |
Protein accession | YP_003111669 |
Protein GI | 256390105 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.22169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.286804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACC CTGAGCCGAC GCCGTCTCAC GCCACACCCG AAGCCACTTC CGGGGACACC TTGCGCGACC TGCCGCACCC GGTCCGCAGC CGCAGCCAGT GGACCGTCCA CGGCGAGCGC CCGGTGTATG AGAACCCGTG GATCGACGTC CTGCTGGCCG AGGTCGAACT CGCCGACGGC ACCCGCTTCG AGCACCACGT CGTCCGCACC CGCAGCGCCG CCGGCTGCGT GGTGACCAGG ACCGAAGCCG GCCGCGAAGA GGTGCTGCTG ATCTGGCGGC ACCGCTTCGC GATCGACAAG TGGGTCTGGG AGATCCCCTC CGGCTTGATC GAGGAGGGCG AGGACCCGGC GGAGGCCGCA CGCCGCGAGG TCGAGGAGGA GACCGGCTGG CGGGTGAGCG ACGTCACACC GCTGCTCACC TTTCACCCGG TCGGCGGGAT GCTGCGGACG CAGTACCGGT TGTTCCGCGC GATCGGTGCC GAACACATCG GAGAGCCGAC GGAGCAGAAC GAAGCCGAGA AAGTCGCCTG GATTCCGCTG GACGAGGTAC TCGGACTCAT CGACGCCGGA CAGATCGCGA CATCCTCCTC ACTCGTCGGA CTGCTGCGAG TCCTCACGCG AAGCTGA
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Protein sequence | MSDPEPTPSH ATPEATSGDT LRDLPHPVRS RSQWTVHGER PVYENPWIDV LLAEVELADG TRFEHHVVRT RSAAGCVVTR TEAGREEVLL IWRHRFAIDK WVWEIPSGLI EEGEDPAEAA RREVEEETGW RVSDVTPLLT FHPVGGMLRT QYRLFRAIGA EHIGEPTEQN EAEKVAWIPL DEVLGLIDAG QIATSSSLVG LLRVLTRS
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