| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0892 |
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| Symbol | |
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| ID | 8332223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1039198 |
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| End bp | 1041201 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954043 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003111666 |
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| Protein GI | 256390102 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.224705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.102157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTCC TGCGCCTGGC GTCCAGGGTC CTCCCGGTGG CCGCGCTCGG TCCGGAGAAC
CCGCTCCCGC CGCTGCGCAA GCTCGCGGAT CCGCGCGGTG GCCTGGACGT CTCCGAGGCC
GACGCCGAAA TGGTCGCCAA CCTCGGCTAC GGCCACGTCG AATCCCTGCT CCCCTACACC
TTCCAGGACG GCTACACCCG CGAGACCCCC GACCGCGAGC TGGTCACGGC GGTGTTGGAG
AACGACGTGC TGCGCGCCGA GTTCCTCCTC GGCTACGGCG GACGCCTGAT GTCCCTGCGC
CACAAGCCCG CCGACCGCGA GCTGCTGCAC TTCCCGCCGA AGCTCCAGCT CGCCAACCTG
GGCCTGCGCA ACGCCTGGTT CGCCGGCGGC GTCGAATGGA ACCTGGGCAC CTTCGGCCAC
ACCGCCCTCA GCTGCTCCCC CCTGCACGCC GTCCGCCTCA CCCGCGAAGA CGGCACCCCG
GTCCTGCGCA TGTACGAGTA CGAGCGCCAG CGCCGCCTGG TCTACCAGCT CGACTGCTAC
CTGCCCGACG GCTCCCCGGT CCTGCTGATC CACGTCCGCG TCCACAACCC CTTCCCCGAG
GACGCGCCCG TCTACTGGTG GAGCAGCGCC GCCGTACCGC AGACCCCTGA CACCCGCGCG
CTGATGCCCG CGACCTCGGC GTACCACTTC TCCTACACCG GCAAGATGCG CCGCATCCCC
TTCCCGCGCT GGCGCGAGGC CGACACCTCC TACCCCGGCC GCATCGACTA CGGCGCCGAC
TACTTCGCCG AGATCCCCGA CGGCGCACGC CGCTGGATCG CCGCGGTCGA CGCGGGCGGA
TCAGGGCTCT TCCAAACCTC GACCGACCGG ATGCGCGGCC GCAAACTCTT CCACTGGGGC
ACCGGATCCG GCGGCCGCAA CTGGCAGGAC TGGCTGTCCG GCCCGCGCCA CGAGTACTTC
GAGATTCAGG CCGGTCTGGC CCGAACCCAG CTGGAACACC TGCGGCTTCC GGGGCGCCGG
TCGTGGTCCT GGGTCGAGGC TTACGGCCTG CTCCAGACCG ACCCCGCCGA CGTCCACGGC
ACGAAATGGC CCGACGCCAC CCAGGCCGCG GACGCCGCGA TCGCCGAGCT GATCCCCGCG
CACCGCCTGG ACGAAGAACT CGCGACCATG ACCGCGCTCG CCGACAAACC ACCGGAAGAA
GTCCTGCACG CCGGAACCGG CTGGGGCGCC CTGGAACGCC GCGCCCTCGG CCGCAACCGC
GCGCTGAGCC TGCCCGGCAC GCCCTTCCCC GACGCCACGA TCGGCCGCGA CCAACAGTCC
TGGCTCTCGC TGGTCCGCAA AGGCCAGATG CCGACGCCGG CGCCGGCCCT GCCGCCGTCC
TCCTACGCCG TCGGCCCGGT TTGGCGCACG CTGCTGGAGA AGGCGACCGC TGACCCCGCA
CGCACAACCC ACGCGACCTG GTTCACCTGG CTCCATCTGG GCGTGAACCG CTACCACGCC
GGCGACCTGG CCGGAGCGCG CGAGGCGTGG GATCAGTCGA TGGCGCAGGC CGAAACCGCG
TGGGCGCACC GGAATCTCGC CATCCTCGAC GCCTCCGAAG ACCGCCTCGG CGACGCCGCC
GACCGCTACC TCCGTGCCTG GCAGCTCTCC CCGCGCCTGC GTCCCCTGAC CATCGAGACC
CTGCGCGCCC TGATCACCGC CAAACGCCCC GGCGAAGCGC TGGACATCAT CGACCGGCTC
AAGGAGCCCG ACCGCTTCGC CGGACGCATC CTGATGCTGG AGTGCCGCGC CGCCCTGGAC
GCCGGGGATC TGGTGCGGGC ACGCCGGATC CTGGAGACCG GTCTGATCGT CGAGGACGTC
CGCGAGGGCG AGGACCCGCT GTCGGACATG TGGTGGGAGT TCCACTCCCG GCAGGCCGGC
GGGCTCGGTC CGGTCGTGTC ACGGCGATTG CGCGAAGAGC ACCCCCTGCC GTGCAGCTAC
GACTACAGCG TCCGCCAGCT GTAG
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| Protein sequence | MSVLRLASRV LPVAALGPEN PLPPLRKLAD PRGGLDVSEA DAEMVANLGY GHVESLLPYT
FQDGYTRETP DRELVTAVLE NDVLRAEFLL GYGGRLMSLR HKPADRELLH FPPKLQLANL
GLRNAWFAGG VEWNLGTFGH TALSCSPLHA VRLTREDGTP VLRMYEYERQ RRLVYQLDCY
LPDGSPVLLI HVRVHNPFPE DAPVYWWSSA AVPQTPDTRA LMPATSAYHF SYTGKMRRIP
FPRWREADTS YPGRIDYGAD YFAEIPDGAR RWIAAVDAGG SGLFQTSTDR MRGRKLFHWG
TGSGGRNWQD WLSGPRHEYF EIQAGLARTQ LEHLRLPGRR SWSWVEAYGL LQTDPADVHG
TKWPDATQAA DAAIAELIPA HRLDEELATM TALADKPPEE VLHAGTGWGA LERRALGRNR
ALSLPGTPFP DATIGRDQQS WLSLVRKGQM PTPAPALPPS SYAVGPVWRT LLEKATADPA
RTTHATWFTW LHLGVNRYHA GDLAGAREAW DQSMAQAETA WAHRNLAILD ASEDRLGDAA
DRYLRAWQLS PRLRPLTIET LRALITAKRP GEALDIIDRL KEPDRFAGRI LMLECRAALD
AGDLVRARRI LETGLIVEDV REGEDPLSDM WWEFHSRQAG GLGPVVSRRL REEHPLPCSY
DYSVRQL
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