Gene Caci_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0879 
Symbol 
ID8332210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1021658 
End bp1022431 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID644954030 
Producthypothetical protein 
Protein accessionYP_003111653 
Protein GI256390089 
COG category[S] Function unknown 
COG ID[COG3361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0511068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.440854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG CGGAGGCGGC GAAGGCAGCG GCGCCCGAGC CGGTCACCGC GGATGCGCCA 
CGGCTGCCTA GCCGCCCGCT GATGACGCAG TCCTGGCTGG ACGCGACGTT CCTGCACTGG
GCCGCCGATC CAGCTCTGGT GGCACCGTTG CTGCCGGCCG GGGTGCGCCC CGATGTCATC
GACGGCGCCA CCTACGTCGG GCTCATCGCC TTCCGCATGC ACCGGATCGG GTGGTGGCCG
CTGCCCGGAA TGCCCTATCT CGGGACCTTC CCGGAGACCA ATGTGCGGCT GTACTCGGTC
GATGCGGCAG GGCGGCGCGG GGTGGTCTTC CGGTCGTTGG AAGCCTCGCG CCTGCTGCCG
GTGGCCACAG CGCGGACGGC GTTCCGGTTA CCGTACCGCT GGGCGCGGAT GTCGGCGTAC
CGCTCCGGAG ATGAGTACTG GTACGGCTCG CGGCGCCGTG AGCCCGGCTT GCCGCCTTCG
CGGAGCATCA TCGGGGTGCG GGTCGGTCCC GCGATCGAGA CGCCGTCCGC GCTCGACCAC
TTCCTGACCG CCCGATGGCG ACTGCACTTC ACGCTCGCCG GCCGGACCGT GCATATGCCG
AACGCGCATC CGCGATGGCC TTTGCACCAC GCCGAGTTGC TGGCGTGTGA GGAGGATCTG
GTCGCCGCCG CGGGGTTGCC CGGGGTCGCC TCAGGGCCGC CGGACAGTGT GCTGTTCTCG
CCGGGCGTGG CGGTGCGGTT CGCGCGGCCT TATGCCGTCG ACCGCCGGCC CTGA
 
Protein sequence
MSPAEAAKAA APEPVTADAP RLPSRPLMTQ SWLDATFLHW AADPALVAPL LPAGVRPDVI 
DGATYVGLIA FRMHRIGWWP LPGMPYLGTF PETNVRLYSV DAAGRRGVVF RSLEASRLLP
VATARTAFRL PYRWARMSAY RSGDEYWYGS RRREPGLPPS RSIIGVRVGP AIETPSALDH
FLTARWRLHF TLAGRTVHMP NAHPRWPLHH AELLACEEDL VAAAGLPGVA SGPPDSVLFS
PGVAVRFARP YAVDRRP