Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0879 |
Symbol | |
ID | 8332210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1021658 |
End bp | 1022431 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954030 |
Product | hypothetical protein |
Protein accession | YP_003111653 |
Protein GI | 256390089 |
COG category | [S] Function unknown |
COG ID | [COG3361] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0511068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.440854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCCGG CGGAGGCGGC GAAGGCAGCG GCGCCCGAGC CGGTCACCGC GGATGCGCCA CGGCTGCCTA GCCGCCCGCT GATGACGCAG TCCTGGCTGG ACGCGACGTT CCTGCACTGG GCCGCCGATC CAGCTCTGGT GGCACCGTTG CTGCCGGCCG GGGTGCGCCC CGATGTCATC GACGGCGCCA CCTACGTCGG GCTCATCGCC TTCCGCATGC ACCGGATCGG GTGGTGGCCG CTGCCCGGAA TGCCCTATCT CGGGACCTTC CCGGAGACCA ATGTGCGGCT GTACTCGGTC GATGCGGCAG GGCGGCGCGG GGTGGTCTTC CGGTCGTTGG AAGCCTCGCG CCTGCTGCCG GTGGCCACAG CGCGGACGGC GTTCCGGTTA CCGTACCGCT GGGCGCGGAT GTCGGCGTAC CGCTCCGGAG ATGAGTACTG GTACGGCTCG CGGCGCCGTG AGCCCGGCTT GCCGCCTTCG CGGAGCATCA TCGGGGTGCG GGTCGGTCCC GCGATCGAGA CGCCGTCCGC GCTCGACCAC TTCCTGACCG CCCGATGGCG ACTGCACTTC ACGCTCGCCG GCCGGACCGT GCATATGCCG AACGCGCATC CGCGATGGCC TTTGCACCAC GCCGAGTTGC TGGCGTGTGA GGAGGATCTG GTCGCCGCCG CGGGGTTGCC CGGGGTCGCC TCAGGGCCGC CGGACAGTGT GCTGTTCTCG CCGGGCGTGG CGGTGCGGTT CGCGCGGCCT TATGCCGTCG ACCGCCGGCC CTGA
|
Protein sequence | MSPAEAAKAA APEPVTADAP RLPSRPLMTQ SWLDATFLHW AADPALVAPL LPAGVRPDVI DGATYVGLIA FRMHRIGWWP LPGMPYLGTF PETNVRLYSV DAAGRRGVVF RSLEASRLLP VATARTAFRL PYRWARMSAY RSGDEYWYGS RRREPGLPPS RSIIGVRVGP AIETPSALDH FLTARWRLHF TLAGRTVHMP NAHPRWPLHH AELLACEEDL VAAAGLPGVA SGPPDSVLFS PGVAVRFARP YAVDRRP
|
| |