| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0761 |
|---|
| Symbol | |
|---|
| ID | 8332091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 891396 |
|---|
| End bp | 892121 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644953913 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003111537 |
|---|
| Protein GI | 256389973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.378108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA CGCTGACGCT CACCAAGCTG GACGTGCTGC GGGTGGTCCG CAACGGCCGC
TACCTGATCT TCGCGATCGC GATGCCGGCG GCGCTGTACC TGATCATCGG CAAGCAGACC
ACGCAGGCCG ACGGCGTCGA CTTCAAGGCG TACTACATGC TGGCGATGGC CACGTACGGC
GCCTTCGCCG GAGCCCTGAT GAACAACTCC ATCCGGATCG CCACCGAGCG CAAGTCCGGC
TGGACCCGGC AGCTGCGGCT GACCTCGCTG CCCGGCTGGG GCTACGTCTT CGCCAAGGTG
GTCACCTCGC TGGTCACGAC GATCCCGTCG GTGCTGGTGG TGTTCGCCAT CGGGGCGTTC
CTGAACGACG TGCAGATGCC GGCCTGGAAG TGGGTCGCGA ACGCGCTGAT CCTGTGGGTG
GTCTCCATGA CCTTCGTCTC CCTGGCGGTC GCGATCGGCT ACCGCTTCGA CCCGGAGACG
GCGCAGCCGG CCGTGATGCT GGTCTTCTTC CCGATGGCGC TGCTCGGCGG CCTGTGGTTC
CCGCTGGGGA CCGGCGTGCT GGAGAAGATC GGCAAGTGGT TCCCGACCTA CCAGGCCCAC
AAGCTGGGGA CGGACATCCT CGCGACCGGC ACGGTCTCGG CGACGTCGAT CGCGGTGGTC
GCCGGGTGGG GCTTGCTGTT CGCGCTGCTG GCGGTCTTCT CCTACCGGTC GGCGAAGGAA
CAGTGA
|
|---|
| Protein sequence | MNATLTLTKL DVLRVVRNGR YLIFAIAMPA ALYLIIGKQT TQADGVDFKA YYMLAMATYG
AFAGALMNNS IRIATERKSG WTRQLRLTSL PGWGYVFAKV VTSLVTTIPS VLVVFAIGAF
LNDVQMPAWK WVANALILWV VSMTFVSLAV AIGYRFDPET AQPAVMLVFF PMALLGGLWF
PLGTGVLEKI GKWFPTYQAH KLGTDILATG TVSATSIAVV AGWGLLFALL AVFSYRSAKE
Q
|
|---|
| |