| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0708 |
|---|
| Symbol | |
|---|
| ID | 8332038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 827129 |
|---|
| End bp | 828160 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953860 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003111484 |
|---|
| Protein GI | 256389920 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.127899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTTC TGGTCACCGG TTCCGCCGGG TTCATCGGAT CGCACGTCGT CGAGGCGCTG
GTCGCGGCCG GGCACGAGGT CGAGGGCTTG GACCTGGTGG ACGGCGAGGA CGTGCGCGAC
GCCGCGGACG TTCGCAGAGC CCTGCGAGGC GTCGACGCCG TGTGCCATCA GGCGGCGAAG
GTCGGTCTGG ACCGGACGGT CGGCGACGCG CCCGATTACG TCTCGCACAA CGACTTCGGG
ACGTCGATCC TGCTGGCCGC GATGGCCGAG GCGGGAGTGC GGGCGCTGGT CTTCGCCTCG
TCGATGGTGG TCTACGGCGA GGGTCGCTAC GAGTGCGCCG AGCACGGCTG GGTGCGTCCC
GGTCCTCGAC GGGAAGACGA TCTGATCGCA GGGCTCTTCG AGCCGCCGTG CCCGACCTGC
GCTTTGCCGC TGGCGCCGGG ACTGGTCGGC GAGGACGCGC CGCTGGATCC GCGGAACGTC
TACGCCGCCT CGAAAGTGAT GACCGAACAC CTGGCGGCCT CGTGGGTGCG GTTGTCCGAC
AGCGTTCGCG CCGTGGGCTT GAGGTACCAC AACGTCTATG GCCCGCGATT GCCGCGCGAC
ACTCCCTATG CCGGAGTGGC GGCGCTGTTC CGCTCAGCAC TGATGCGGGG CGAGGCGCCG
GCGGTGTTCG AGGACGGCGG TCAGCGGCGG GACTTCGTGC ACGCGCGCGA TATCGCGACG
GCGAACGTGG CTGCGCTGGA GTGGGCCGCG AACGTGGACG GACGCGAACA CGGACTCAGC
GAGAACGGAC TCAGCGAGAT GCGCGTCTAC AACGTCGGCA GCGGAACGCC GCGCACCGTC
GGCGAGATGG CGGCGGAGTT GGCGCGCGCG ATGGACGGAC CGGCGCCGGT CGTGACCGGC
GGCTACCGCC TGGGGGACGT CCGGCACATC ACCGCTTCGA GCGCGCGCAT CCGCGACGAG
CTCGGCTGGC GGCCGCGCGT GGAGTTCGCC GACGGGATGG CGGAGTTCGC GCTAACCCGT
TCGCTCGCCT AG
|
|---|
| Protein sequence | MRVLVTGSAG FIGSHVVEAL VAAGHEVEGL DLVDGEDVRD AADVRRALRG VDAVCHQAAK
VGLDRTVGDA PDYVSHNDFG TSILLAAMAE AGVRALVFAS SMVVYGEGRY ECAEHGWVRP
GPRREDDLIA GLFEPPCPTC ALPLAPGLVG EDAPLDPRNV YAASKVMTEH LAASWVRLSD
SVRAVGLRYH NVYGPRLPRD TPYAGVAALF RSALMRGEAP AVFEDGGQRR DFVHARDIAT
ANVAALEWAA NVDGREHGLS ENGLSEMRVY NVGSGTPRTV GEMAAELARA MDGPAPVVTG
GYRLGDVRHI TASSARIRDE LGWRPRVEFA DGMAEFALTR SLA
|
|---|
| |