| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0680 |
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| Symbol | |
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| ID | 8332010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 788176 |
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| End bp | 790605 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644953832 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003111456 |
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| Protein GI | 256389892 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC TGGGCAAGGT GGTCCGCTCC GGCGTCGGCC GGCGCCGCGT CCAGTCCTTC
GTCATGGCCC TGACCACGCT CGCCGCCGTG ACCTCCTCCG TGCTCTCGCT CGGTCTGCTC
ACCGCGGTCT CAGCGCCCTT CGAGCACGCC TTCGCGCACC GCCACGGCGC GCACCTGGCC
GTGCAGTTCA ACGGCAGCAA GGCGGCGCCG GACCAGATCG CCGCCACCGC GCACGCCGCC
GGCGTCACCG AGTCCTCCGG CCCGTACCCG ATCACCACCG CGCTGGACAC GACGATCGGC
AGCGACTGCA CCGCGACCGG CGGGCCCGGC ATGCCCTTCG CCGGCAGCTC CGCGCCGGCG
GCCACGGTGT CGACGCGGCC GAGCCTGTCG GGCGGCTCCG GACTGGACCA GATCGTGCTG
GACCACGGCG CCTGGCCGAC GACCGCGAAC CAGATCGTCC TGAACAACTT CCCGGTCGAC
TGCCTCGGCA AGTCGGTGGT GTTCAGCTCG CTGCCGGGCA AGCCGTCGTT CGTCGTCGTC
GGGTTCGCGA ACTCGCTGAC CAGTACCGCC ACCGGCTGGA CCACCGAGGC CGGCTTCGCG
CGGCTGACGG CCGGCGGCGC GCAGGCGGAC TCCCAGATGC TCTACCGGTT CGCCTCCGCC
GGGACCGATG CCCAGATCGC CGCCGACCGG CAGGCGGTCA CCGCCGCCGC GCCGGCTGGC
GCCTACGAAG GCTCGCAGTC GTACCTGACC GCCGAACAGC AGGCGACCGG CAACGCCAAG
GCGTTCGTGC CGTTCCTGAT CGTGTTCGGC TTCCTCGGCC TGTTCCTGTC GGTGCTGATC
ATCGCGATCG TGGTCAGCGG CGCGGTGGTG TCGGCGACCC GGCGGATCGG GATCCTGAAG
TCGCTCGGCT TCACCCCGGC GCAAGTGGCC CGCGCTTACG CCGCGCAGGC TTTGATCCCG
GCGGCGGTCG GCGTGATCGC CGGAACGGTC TTCGGCAACC TGCTGGCCGT CCCGGTGCTG
AACGGCACCA GCCACGATCT CGGCGCGGCC GGTGCCGGCC TGCCGTTGTG GGTGAGCATC
GTCGTGCCGC TGGGGACGCT GGTCCTGGTC GGGATCACCG CGCTCGTGCC GGCGCTGCGG
GCCGGCCGGC TGCCGGCGGT GCAGACGCTG GTGGTCGGCC GGGCTCCGAG GGCCGAGCGC
GGACGTGCGG CGCAGCGTCT GGCGTCCCGC CTGCCGCTGC CCCGCGCGAT GTCGCTGGGA
CTGGCCCAGC CCTTCGCCCG GCCCGCGCGG GCCGCGCTGG TCGGCGCCGC GGTGCTGTTC
GGAGCGGTGA GCGTGACGTT CGCGCTGGGG TTGGAGACCG GCTTCAGCAG GTTCCAGCAG
GAGCGGACCG CCGGGTTCAA CGACGCCTCG GTGATCGTGG TGCCGAGTCA CTCCGACAGC
AGCGGGATTC CGCATGGCCC GGGCGGGTTC TACGGTCCGA ACGACCCGCG CACGCCGCAT
CTGGACCCGG CGAAGGTCGC CGCCGCGCTG GCCTCCGTCC CGGGCACCGA GGCCGCCTTC
GGCTGGGGGG ACAGCGGCGC GACCATCATC GGCGCGCCGA CCGGCGACCC GAGCGAGGTG
GACACCATCT CCGGGACCTT CTCCTGGACC GGGCTGGAGC TGATCTCCGG CCGCTGGTAC
TCCGGGCCCG GCGAGGCGGT GGTCAGCGAC CGGCTGGCGT CCGCGATGGG GACGCACGTC
GGCGACACTG TCACCGTCGT GCAGTCGGGC AAACCGCTCG CCCTGAAGGT GGTCGGGATC
GACTTCGACA CCCACGACAG CGGACGCTCC GTGCTGGTCG ACAGCGCGAC GTTCAGCGCC
GCCGGACTGA CGCCGCGGAC CGACCAGTTC AACGTGGAGC TGGGCGCGAA CGTCGACGGA
CCGAACTGGG CCGCCTCCGC CACGGCCGCG CTGTCGCCGC TGCACGCGTC GGTCGACCAC
GAGCCGGGCG GCAACCGGTC CGACGTGGTG CTGACGATGA GCGCGCTGGT GGCGACGCTG
TCGGTGATGC TGCTGGCGGT CGCGGCGCTC GGGGTGCTGA ACACCGTGGT CCAGGACACC
CGCGAACGGA TCCACGACCT GGGGATCTTC AAGGCGCTGG GAATGACGCC GCGGCAGACC
GTGAGCATGG TGCTGACCTC GGTGGCGTTC ACCGGGCTGA TCGCCGGGCT GATCGGGGTG
CCGATCGGGA CGGCGCTGGA GAAGGCGACG ATCACCCCGA TGGGCAACGC GGTCGGCATG
CATCTGCCGC CGAGCGTGAC CCACACCTAC TCGCTGAGCC TGTGGCTTCC GCTGCTGGCC
GGCGGGGTCG CCATCGCGGT GCTCGGGGCG CTGCTGCCGG CCGGCTGGGC GGCGCGGTCG
CGGACCGCCG CGGCGCTGCG GACCGAGTAG
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| Protein sequence | MSALGKVVRS GVGRRRVQSF VMALTTLAAV TSSVLSLGLL TAVSAPFEHA FAHRHGAHLA
VQFNGSKAAP DQIAATAHAA GVTESSGPYP ITTALDTTIG SDCTATGGPG MPFAGSSAPA
ATVSTRPSLS GGSGLDQIVL DHGAWPTTAN QIVLNNFPVD CLGKSVVFSS LPGKPSFVVV
GFANSLTSTA TGWTTEAGFA RLTAGGAQAD SQMLYRFASA GTDAQIAADR QAVTAAAPAG
AYEGSQSYLT AEQQATGNAK AFVPFLIVFG FLGLFLSVLI IAIVVSGAVV SATRRIGILK
SLGFTPAQVA RAYAAQALIP AAVGVIAGTV FGNLLAVPVL NGTSHDLGAA GAGLPLWVSI
VVPLGTLVLV GITALVPALR AGRLPAVQTL VVGRAPRAER GRAAQRLASR LPLPRAMSLG
LAQPFARPAR AALVGAAVLF GAVSVTFALG LETGFSRFQQ ERTAGFNDAS VIVVPSHSDS
SGIPHGPGGF YGPNDPRTPH LDPAKVAAAL ASVPGTEAAF GWGDSGATII GAPTGDPSEV
DTISGTFSWT GLELISGRWY SGPGEAVVSD RLASAMGTHV GDTVTVVQSG KPLALKVVGI
DFDTHDSGRS VLVDSATFSA AGLTPRTDQF NVELGANVDG PNWAASATAA LSPLHASVDH
EPGGNRSDVV LTMSALVATL SVMLLAVAAL GVLNTVVQDT RERIHDLGIF KALGMTPRQT
VSMVLTSVAF TGLIAGLIGV PIGTALEKAT ITPMGNAVGM HLPPSVTHTY SLSLWLPLLA
GGVAIAVLGA LLPAGWAARS RTAAALRTE
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