Gene Caci_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0661 
Symbol 
ID8331991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp768903 
End bp769868 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content73% 
IMG OID644953814 
ProductROK family protein 
Protein accessionYP_003111438 
Protein GI256389874 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA CTGACACCTC CGGGGACGGC CCGGTGCTGG CGATCGACGT CGGCGGGACG 
AAGATGGCGG TCGGGGCGGT CGACGCGCGC GGGGAGGTTC TGGCCTCCTT TCGGGTGCCG
ACGCCGGTGG GGGCGGGGGC GGACGGCGAG GTGCTGTACG CCGCGCTGCT CGACGCCGTC
GACCAACTGC CCTACGAGCG CGGCGCGTTT CGGGCGGTGG GGGTCGGGTG CGGGGGTCCG
ATGCGGTGGC CTGCGGGGGA GGTGTCGCCG TTGAACATCC CCGGGTGGCG CGGGTTTCCG
TTGCGGTGGC GGCTGGAGGC GGACTTCCGG CGGGATGTGC GGCTGCACAA TGACGCCATC
TGCCTGGCCG CCGCCGAGCA CTGGCAGGGT GCCGGGCGCG GGGTGGCGAA CATGCTCGGC
ATGGTCGTCT CCACTGGCGT CGGGGGCGGC CTGATCCTCG GCGATCGGCT CATCGACGGC
GCCAAGGGCA ACGCCGGGCA CATCGGGCAC GTCATCGTGG ACCAGGAAAC GCCTTGCGCG
TGCGGTGGGA CCGGCTGCCT GGAAGCTGTC GCGAGCGGTC CGCGTATGGC CGCGTGGGCG
GCGGCGCAGG GGTGGCGCGT CGGCGAGAAG AGCCGCACCG GCAAGGACCT CACCGACGAC
GCCCGCGCCG GCGACGGCAT CGCCGAGGCC GCCTTCACCC GCGCCGGTAC CGGGCTCGGC
ATCGCGATCG CGGGGGCGGC GGCGATGTGC GACCTGGAGT TGGTGACCAT CGGCGGCGGC
ATCGTGCAGG CGGGGGAGCT CCTCTTCGAG CCCTTGCGCG CCGCGCTCCA CCGGCATGCG
CGGCTGGACT TCACCAAGAA TCTGAAGGTG GTCCCGGCCG ATCTGGGGCA GGACGCCGGA
CTGGTCGGTG CGGCGGCGCT GATCCTGCGC GGTGACGCCT ATTGGTCGGC GGATCGCGTC
GACTGA
 
Protein sequence
MSVTDTSGDG PVLAIDVGGT KMAVGAVDAR GEVLASFRVP TPVGAGADGE VLYAALLDAV 
DQLPYERGAF RAVGVGCGGP MRWPAGEVSP LNIPGWRGFP LRWRLEADFR RDVRLHNDAI
CLAAAEHWQG AGRGVANMLG MVVSTGVGGG LILGDRLIDG AKGNAGHIGH VIVDQETPCA
CGGTGCLEAV ASGPRMAAWA AAQGWRVGEK SRTGKDLTDD ARAGDGIAEA AFTRAGTGLG
IAIAGAAAMC DLELVTIGGG IVQAGELLFE PLRAALHRHA RLDFTKNLKV VPADLGQDAG
LVGAAALILR GDAYWSADRV D