Gene Caci_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0648 
Symbol 
ID8331978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp754620 
End bp754847 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content69% 
IMG OID644953801 
Productregulatory protein, FmdB family 
Protein accessionYP_003111425 
Protein GI256389861 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.725666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGGG GTATGGCCCG TTACGAATAC CGCTGTCGCG CGTGTGGCGA CACCTTTGAG 
CTGTCCCGCC CGATGTCCGA GGCGTCGGCT CCCGCCGTGT GCCCCGCGGG CCACGACGAC
ACCGTCAAGC TGATCTCCGC GGTCGCCGTG AACGTCGGCG GCGGAACCAA GACCGCCGCA
GCATCCGGCA ACGCTGGCGG ATGCTGCGGC GGTGGCTGCT GCTCGTAG
 
Protein sequence
MIRGMARYEY RCRACGDTFE LSRPMSEASA PAVCPAGHDD TVKLISAVAV NVGGGTKTAA 
ASGNAGGCCG GGCCS