Gene Caci_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0643 
Symbol 
ID8331973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp747983 
End bp749113 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content76% 
IMG OID644953796 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003111420 
Protein GI256389856 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC TCACAAGGCT GGGTGTCGCC AAGCGTGTCG CCGCTGCCGC CGCACTAGGC 
GGCGGGGGGA TCGGGGTCCT CACAGGCGGC GCTATCGGGC TGATCGTCGC CGAGGCGAAA
CTCGCCCGGC GGGCCATCGG CCCTGCCAAA GGAGATCCGC CGCGCGCGGA CGGGGTTTAC
GGGGCGTGGT ACGCCACGCC CGGCGTCGAG GTGATCCGCA TGGCGGTCCT CGGCGACAGT
TCCGCGGCCG GCTACGGCGT GACCGAGTCG GCGCGCACGC CCGGCGCGCT GTTGGCGTCC
GGGCTGGCCG AGGCGGCCAA TTCCCCGGTG CGGCTGCACA ACGTGGCGAA GGTCGGCGGC
CAGTCCTCGG ACCTGGGCTG GCAGCTGGAG CGGGTGCTGG CGTCCGCGCC GGACGGCCAG
GCGCCGCACG TCGTCATGAT CATGATCGGC GCCAACGACG TGACGCACCG GGTCAAGGTC
GCCGAGTCGG TCCGCTTCCT GGGCGACGCC GTGCGCCGGC TGCGCGCGGC CGGGATCGAG
GTCGTCGTCG GCACCTGCCC GGACCTGGGC ACCATCCGCC CCGTGGCGCA GCCCTTGCGC
CGCCTGGCGC GCCGCTGGTC CCGCCAGCTC GCCGCCGCGC AGACCGTGGA AGTCGTCTCC
GCCGGCGGCC GCACGGTCTC CCTGGGCTCG CTGCTCGGCC CGGAATTCGA CGCCCGCCCG
GAGGACATGT TCGGCCCGGA CCGCTTCCAC CCCAGCGCCG AGGGCTACGC GGCCGCCGCC
ATGGCCCTGC TCCCCTCGAT CGCCGCCGCC ATCGGCCGCT GGCCCGACGC CGCCGCCGGC
CAGCCGGACG TCCTGGAACC GGCCCGCGGC GAAGCCCGCA TGCCCCTGGC CCGCGCCGCC
GTCCTCGCCG CCCGCCACGG CGGCACCGAG GTCGGCCGCG AGGTCGGCAG CGCCGCCCGC
GCCGGCTGGG GCATCCTGCG CCACCGCCGC CGCCAGCAGA TCGCCGAGCC GGTGGTCCCG
GAGGGCGCCG ACAAGACCGA CGCCGAGGCG GCGGGATCCG GCTCCGGATC CGGCAAGGAA
GCCGGGACCG GCGCGAAAGC GACAGTCTCG AACGACGTCG CGGCTTCCTG A
 
Protein sequence
MTGLTRLGVA KRVAAAAALG GGGIGVLTGG AIGLIVAEAK LARRAIGPAK GDPPRADGVY 
GAWYATPGVE VIRMAVLGDS SAAGYGVTES ARTPGALLAS GLAEAANSPV RLHNVAKVGG
QSSDLGWQLE RVLASAPDGQ APHVVMIMIG ANDVTHRVKV AESVRFLGDA VRRLRAAGIE
VVVGTCPDLG TIRPVAQPLR RLARRWSRQL AAAQTVEVVS AGGRTVSLGS LLGPEFDARP
EDMFGPDRFH PSAEGYAAAA MALLPSIAAA IGRWPDAAAG QPDVLEPARG EARMPLARAA
VLAARHGGTE VGREVGSAAR AGWGILRHRR RQQIAEPVVP EGADKTDAEA AGSGSGSGKE
AGTGAKATVS NDVAAS