Gene Caci_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0638 
Symbol 
ID8331967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp743488 
End bp744633 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content72% 
IMG OID644953790 
Producthistidine kinase 
Protein accessionYP_003111415 
Protein GI256389851 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.509372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC TGACGGTGAA CATGATGGAC CGCAAGGCCT ATTTCTGGGG CATCCAGGCC 
CTGCGCTCCG GCGGTCTGGT GGCCCTCGGC ATCACGCTGT TCGGGGTGAG CCCGAAGCCG
GGTCTGCACG AGCGCGGGCT GGCCGTCACC ATCACGTTGG CCGTGGTGGC GGTGGCCTGG
ATCGGGATGA TCACGTTCGA CATCCGCAAG TGGCCCATCG AGTACCCCCT CGCCCTGCTG
TCGGTCAGCG GCGGCCTGCT GTCGATCCTG CAACCGGGAC CGGCGATCTT CGTCCCGGCG
GTCGCGGCGT TCTCCGCGGG CTCCAACCTG GCGCCGCAGG TCTCGGCGGC GATCACGGTC
GCCGGCGCCC TGTCGCTGAC CGTCACCGCG CTGGTGATCG GCGCGCCGAC CTCGGCGGTG
CTCGGCTTCG TCGTCATCCT GGGAACCGCG CTGGCGATGG GCACGGTCCG CTACGCGATC
GCCCAGCGCG CGGGCCAGGC CGAACAGCTG CTGGAGCAGA CCCTGCGCGC GTCGGCGGCC
GAGACCGAGG CGGCGGTGCT CGGCGAGCGC ACCCGCATCG CCCGCGAGAT CCACGACATC
CTGGCGCACT CGCTCGGGGC GCTGGCGATG CAGGTCGAGG CCGCGCAGGC GTTGCTGACG
CAGGAGAATC CGGACATCGC GAAAGCCGTC CGCTGCGTGG AGCGCGCCGG GCAGCTGACG
CGCGAAGGCC TCGTGGAGAG CCGCCGCGCC GTCCACGCGC TGCGCGAGGA CATCGGCCCG
CTCTCGGAGA TGATCGGCAC CATGGTCGAG GCCGACGGCG GCACGATGAC CACGGTCGGC
GAACCCCGCA AGCTCCAGGC GGACGCGGCG CTGGCGCTGT ACCGCACGGC GCAGGAAGCG
GTGACGAACG CGCGAAAGCA CGCGCCGGGC AAGGCGCCGT CGGTCGATCT GCGCTACGAC
CCCGACGCGG TCCGCCTGAC GGTGACCAAC GAACTCGCCG AAGCCGACGC CGCCCGGCCG
CTGACGGACT CCGGCGGCGG CTTCGGTCTC AGCGGACTGC GCGAGCGGAT GGAACTGGCC
GGCGGCACGC TGGAGGCCGG GCGCGACGGG GAGGATTGGA AGGTGCGAGC GGTCGTGCCG
GGCTGA
 
Protein sequence
MAALTVNMMD RKAYFWGIQA LRSGGLVALG ITLFGVSPKP GLHERGLAVT ITLAVVAVAW 
IGMITFDIRK WPIEYPLALL SVSGGLLSIL QPGPAIFVPA VAAFSAGSNL APQVSAAITV
AGALSLTVTA LVIGAPTSAV LGFVVILGTA LAMGTVRYAI AQRAGQAEQL LEQTLRASAA
ETEAAVLGER TRIAREIHDI LAHSLGALAM QVEAAQALLT QENPDIAKAV RCVERAGQLT
REGLVESRRA VHALREDIGP LSEMIGTMVE ADGGTMTTVG EPRKLQADAA LALYRTAQEA
VTNARKHAPG KAPSVDLRYD PDAVRLTVTN ELAEADAARP LTDSGGGFGL SGLRERMELA
GGTLEAGRDG EDWKVRAVVP G