Gene Caci_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0620 
Symbol 
ID8331949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp723523 
End bp724371 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID644953772 
ProductNUDIX hydrolase 
Protein accessionYP_003111397 
Protein GI256389833 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.253457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGG CGTTGATCTG GCACGTGATC GCGCAGCAGA AGGCATGGCT GGACTCGCAT 
CCGGACACTG ATCCGGCACT CGCGGTCCCG CTGCGGGTGC TGAAGGTCGC CGAGGAGGCC
GGCGAAGCGG CGGCGGCACT GATCGGCACG ACCGGTCAGA ACCCGCGCAA GGGACGCAGC
CACACCGAAG CGGACCTGGA GGCAGAGCTC TGCGACGTGA TCACCGCGGC GTCGGTCGCG
CTGGCGACGC TGGTCCCGGA CCCCGAACGT GTGCTGCACG ACCACATGGG CCGCATCTAC
ATGCGCTCGA TCGAGGCCGG AGCGCCGCGC CTCGCGGAAG TCGGAACCGG GCTCGACCGC
GCGGCATATG CGGCATCGCT GCCGAAGGTG GTCGTCGGCG CCTCGATGCT GTTCCACGAC
GAGGCACGCA AAGTCCTGAT GGTCCGCCAG TCCTACCGCC CCGACGGGAA GTGGAGCTTC
CCCGGCGGCG GTGTGGAGGA GGGCGAGTTC CCCGCCCAGG CCGCACGCCG CGAGGCGCTG
GAGGAGGTAG GCCTGGACGC CGAACCCGGC GCCCTCCTCA CGGTCGACTG GCGCCCCCGC
GACGCCGAAC GCCCGCCCCT GATCCACTAC CTCTACGACG GCGGCACCCT CACCCCCGAC
GACATCGCCC GCATCCGCCT CCAGGACGAC GAGATCGTCG AGCACGGCTT CTTCGATCTC
GAAGCCGCCC GCGAACTCCT GGCGCCGCAC ACCTTTGACC GGCTGGTGCA CGCCGAGGCC
GCACGGGAGG GGCGGATCGC GGTGCAGGAT CTTCAGGAGG GGCAGCCGCG ACAGGCGGAA
CGGAACTGA
 
Protein sequence
MDEALIWHVI AQQKAWLDSH PDTDPALAVP LRVLKVAEEA GEAAAALIGT TGQNPRKGRS 
HTEADLEAEL CDVITAASVA LATLVPDPER VLHDHMGRIY MRSIEAGAPR LAEVGTGLDR
AAYAASLPKV VVGASMLFHD EARKVLMVRQ SYRPDGKWSF PGGGVEEGEF PAQAARREAL
EEVGLDAEPG ALLTVDWRPR DAERPPLIHY LYDGGTLTPD DIARIRLQDD EIVEHGFFDL
EAARELLAPH TFDRLVHAEA AREGRIAVQD LQEGQPRQAE RN