Gene Caci_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0568 
Symbol 
ID8331896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp654056 
End bp655348 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content75% 
IMG OID644953720 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_003111346 
Protein GI256389782 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR03566] FMN reductase, MsuE subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.036155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.154432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCAT ACGAGGCGGC GGACAACGCC TTCGGCGACG AGGGCTACCC GCCCCCAGGC 
AACAGCGCCT GGTTCGGCGG AGCACCAGGA GTCCCAGCCC TCCCCGGCGA CGGCGCCCCG
GCGAACGGCC ACGAGTTCGC CCCGGCAGCC GGCTTCGGCA CGGCGCCGGG CGGCTTCGGC
GCGGCCATCG GCACCGCCTT CGCCGACGCC GGATTCGGCG CGATGCCGAC CGGTGGCGGC
GACTTCGGCG GGGCGAACGG CGCTGGCTTC GGTGGTGCAA ATGGCAGCGG CTCCGGCGGT
GCGAGCGGCA CTGGCTCCGG CGGTGCGAAT GGCGCTAGCT ACGGCGGTGC GAACGGCGGC
GGCTACGGCG CGGGCGATGG CTTCGGTGGC ACAAACGGCA GCGGCTCCGG CTCCGGCGGT
GCTAACGGCG CTGGCTTCGG CGCTTCTCAC AGCAGCGGCA CCGGCTCCGG CTCGACCTCC
GGCCGCACCG CCCTCCCGGA CTACCCCGCC TCGAGCCCCA ACGCCGTCGC GTACACCGAC
CCCGGGTTCG GCCGTCAGGA CTTCTCCGCC CCGCCGGCCA CGCGTCACGC CGCCGATCCG
ACCAGTAGCA GTGCCCTGCT CCCGGCGCTG GCGCACCCGG GTCCGCCGCG TCCTGGTCCG
GCCGGCGACG TCCTGCGGCT GGTGGCTGTC ACCGCCGGGC TCGGGCAGCC CTCGACCGCG
CGTATCCTGG CCGACCGGCT CGCCGAGGCG GCTCGGGCGC GGCTGGGCGA GCGCGGGCGG
CAGGTGCTCG TGGAGGTCTT GGAGCTGCGC GATCTGGCGC TGGACATCGC CGGGGCGATG
GTCGCCGGCT TCCCGGGCGC CAAGCTGCGC GCCGCGCTGG ACGCCGTGGA GGGCGCCGAC
GGCCTGATCG CCGTCAGCCC CATCTACACC GCCAGCTACA GCGGCCTGTT CAAGTCCTTC
TTCGACGTCC TGGACAAGGA CGCGCTCACC GGCAAGCCAA CCTTGATAGC GGCCACCGGC
GGCACCGCCC GGCACTCGCT GGCCCTGGAC CACGCCCTGC GCCCGATGTT CGCCTACCTG
CGCGCCTTCA TGGTCCCGAC CGCGGTCTTC GCCGCCTCCG AGGACTGGGC GTCGACCGGC
GAGAACAGCC TGAATGAGCG CATCAGCCGC GCCGGCACCG AACTCGGCGA CCTGATGGCC
GGCACCCCCG CCGCCGGCCG CCGCCGCCGC GACGAGTTCG AGGACGTCGT GCCCTTCGAG
CAGCGGATGG CCGCACTCAG GTCCGGGATC TGA
 
Protein sequence
MSAYEAADNA FGDEGYPPPG NSAWFGGAPG VPALPGDGAP ANGHEFAPAA GFGTAPGGFG 
AAIGTAFADA GFGAMPTGGG DFGGANGAGF GGANGSGSGG ASGTGSGGAN GASYGGANGG
GYGAGDGFGG TNGSGSGSGG ANGAGFGASH SSGTGSGSTS GRTALPDYPA SSPNAVAYTD
PGFGRQDFSA PPATRHAADP TSSSALLPAL AHPGPPRPGP AGDVLRLVAV TAGLGQPSTA
RILADRLAEA ARARLGERGR QVLVEVLELR DLALDIAGAM VAGFPGAKLR AALDAVEGAD
GLIAVSPIYT ASYSGLFKSF FDVLDKDALT GKPTLIAATG GTARHSLALD HALRPMFAYL
RAFMVPTAVF AASEDWASTG ENSLNERISR AGTELGDLMA GTPAAGRRRR DEFEDVVPFE
QRMAALRSGI