Gene Caci_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0561 
Symbol 
ID8331889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp645797 
End bp646144 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content71% 
IMG OID644953713 
ProductYCII-related protein 
Protein accessionYP_003111339 
Protein GI256389775 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0502519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGT ACGCGATCCT CTTGTTCGAC ACCGCGGGTG CCGGCGACTA CACCCCCGAG 
CAGCAGCAGG CGAGCCAGCG GCACGCCGAG GACCTCATCG AGTCCGGCGT CCTGAGCAGC
GCCTACGCCC TGGATTCCGT CGAGACCGCC ACCTCCGTGC GCGGCGACGC GGTCACCGAC
GGGCCCTTCA TCGACGCCAA GGAGGTCGTC GCCGGGTTCT ATGTCGTCGA GGCTCCCGAC
CTGGACGCGG CGCTGGAGCT GGCCAAGCGC AATCCGGCCG TGCAGTGGGG GCGCGGCGGC
ATCGAAGTGC GGCCCGTCGT GGGCAGCCTT CCGCCCAGCA CTCGATGA
 
Protein sequence
MAQYAILLFD TAGAGDYTPE QQQASQRHAE DLIESGVLSS AYALDSVETA TSVRGDAVTD 
GPFIDAKEVV AGFYVVEAPD LDAALELAKR NPAVQWGRGG IEVRPVVGSL PPSTR