Gene Caci_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0560 
Symbol 
ID8331888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp645280 
End bp645768 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID644953712 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003111338 
Protein GI256389774 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0517108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACC TGCAGACGGC GCCGCCTTCT CTGACCAGCC TGACCACCTA CCTGCTCTCG 
CGGACCGGGA AGATCGCTCG CGGGCGGCTG GCTGAGCGTT TCTCCGAGCG CGGGCTGCGG
CTGTGGCACC ACGCGGTGCT GGCGGCGCTC GCCGATTTCG GGCCGCACGT GCAGCGCGAC
CTCGCGGCGC GGTTGGCGAT CGATCCCAGC GATATGGCGA AGATCATCGA CGAGCTGGCT
GGGAGGGGAA CCGTCGAGCG GGCCCGGGAC GCCGCGGACC GTCGGCGCAT CACCGTCACG
CTCACCGACG CCGGCCGGAC ATTGCTCGCC GAGCTGGACG CGGAAGCCGA TGTCGTCCAG
AGCGAGGTCC TGGAACCGCT CACGAAGGAC GAGCGAGAGC AGTTGCATGC CCTGCTCGGG
AAAGTGTTCG AGGAAAATAA TTCGCGAAGG GCTGTCGATT CCGCGCGACC CGTTCGACGG
CAGGGGTGA
 
Protein sequence
MDDLQTAPPS LTSLTTYLLS RTGKIARGRL AERFSERGLR LWHHAVLAAL ADFGPHVQRD 
LAARLAIDPS DMAKIIDELA GRGTVERARD AADRRRITVT LTDAGRTLLA ELDAEADVVQ
SEVLEPLTKD EREQLHALLG KVFEENNSRR AVDSARPVRR QG