Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0560 |
Symbol | |
ID | 8331888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 645280 |
End bp | 645768 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953712 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003111338 |
Protein GI | 256389774 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0517108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGACC TGCAGACGGC GCCGCCTTCT CTGACCAGCC TGACCACCTA CCTGCTCTCG CGGACCGGGA AGATCGCTCG CGGGCGGCTG GCTGAGCGTT TCTCCGAGCG CGGGCTGCGG CTGTGGCACC ACGCGGTGCT GGCGGCGCTC GCCGATTTCG GGCCGCACGT GCAGCGCGAC CTCGCGGCGC GGTTGGCGAT CGATCCCAGC GATATGGCGA AGATCATCGA CGAGCTGGCT GGGAGGGGAA CCGTCGAGCG GGCCCGGGAC GCCGCGGACC GTCGGCGCAT CACCGTCACG CTCACCGACG CCGGCCGGAC ATTGCTCGCC GAGCTGGACG CGGAAGCCGA TGTCGTCCAG AGCGAGGTCC TGGAACCGCT CACGAAGGAC GAGCGAGAGC AGTTGCATGC CCTGCTCGGG AAAGTGTTCG AGGAAAATAA TTCGCGAAGG GCTGTCGATT CCGCGCGACC CGTTCGACGG CAGGGGTGA
|
Protein sequence | MDDLQTAPPS LTSLTTYLLS RTGKIARGRL AERFSERGLR LWHHAVLAAL ADFGPHVQRD LAARLAIDPS DMAKIIDELA GRGTVERARD AADRRRITVT LTDAGRTLLA ELDAEADVVQ SEVLEPLTKD EREQLHALLG KVFEENNSRR AVDSARPVRR QG
|
| |