| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0516 |
|---|
| Symbol | |
|---|
| ID | 8331843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 602879 |
|---|
| End bp | 603754 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953676 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003111303 |
|---|
| Protein GI | 256389739 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.241118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAGGA TCGTGCAGGC TCAGGACGGC CGGAAACTGG CCGTGGAGGA GTGGGGCGCA
CCGGACGGTG CCGCCGTCTT CCTGATGCAT GGAACGCCCG GCAGCCGGTT CGGGCCGCGT
CCCCGCGAGT CGGTGCTGTA CCGGCTGGGG GTACGGCTCA TCGCATACGA CCGGCCCGGG
TACGGGGAGT CCGACCGGCT GGGCGCCCGG GCTGTGGCGC ACGCGGCCGG GGACGTGGCT
GCCATCGCCG ACGCGCTCGG GCTGGACCGC TTCGCGGTGC TCGGGCGGTC CGGCGGCGGA
CCGCACGCCC TGGCCTGCGC CTGTCTGCTC GGCGACCGCG TGCGGTGCGC GGCGGTGCTG
GTCGGGCTGG CGCCCCGGGA CGCCGGCGGG CTGGACTGGT ACGCCGGGAT GACCGCCTCG
AACGTAGCCG CGTACCAGAC CGCCGAGTCC GGGGCGCGGG CCATCGCGGC GCGGTTCGAG
GCGCAGGCAG CGTTGATCCG GCGAGATCCG GCCGCGCATC TGCCTTATCG GGACCGGGAG
CTGTCGCGGT CCGACCAGGA GGTGATGGCC GACATCGGAA TCAGAACCAT GATGTTGTCC
AACTTCGCCG AGGCTGTGAA GCGGTCCGGG GTGGGGTGGA TCGACGACGC GCTGTCGTTC
GTCGCCGCGT GGGGCTTCGA TCCGGCCAGA ATCAACGTGC CGGTACTGTT GTGGCACGGC
GCGCGCGACG TGCACGCCCC GGTGCGGCAC ACGATATGGC TCGCCGAGCG CATCACCGAT
AGCCATCCGG TGATCGTCGA CGACGCGGCG CACTTCGGTG CCCTGTCTGC GATGCCCCGG
GTGCTGTCGT GGCTGGTCGA CGGCAAGCGG CCGTGA
|
|---|
| Protein sequence | MTRIVQAQDG RKLAVEEWGA PDGAAVFLMH GTPGSRFGPR PRESVLYRLG VRLIAYDRPG
YGESDRLGAR AVAHAAGDVA AIADALGLDR FAVLGRSGGG PHALACACLL GDRVRCAAVL
VGLAPRDAGG LDWYAGMTAS NVAAYQTAES GARAIAARFE AQAALIRRDP AAHLPYRDRE
LSRSDQEVMA DIGIRTMMLS NFAEAVKRSG VGWIDDALSF VAAWGFDPAR INVPVLLWHG
ARDVHAPVRH TIWLAERITD SHPVIVDDAA HFGALSAMPR VLSWLVDGKR P
|
|---|
| |