Gene Caci_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0472 
Symbol 
ID8331799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp534855 
End bp536432 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content69% 
IMG OID644953638 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003111265 
Protein GI256389701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.562012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA GTAAACGCAA CGGCGTCGCC GCTCTCGGGC TCGCCTTGGG CGTTGCCGGC 
GTCGGTCTGT CCGGCACCGC GAGCGCGACG CCGGACGCCG CGTCGCAGGC TTCTGCGATA
TCTGCCATCA CCTGGCAAGC GTGTCCGCAG TATTCCGACG ATGTCCTGGG AGCCGTCGGC
ATCCAGCCGA AGGACCGGGC GGCGTTCCGG GACATGTGGG CACGCACCGA CTGCGGGACG
GTGAGCGTCC CGCAGGACTA CCGGCATCCG GAGGGACAGC ATGTCACGAT CGCGTTCACC
CGGCTGAAAG CCAAGGACCA GGCGCACCGC CAGGGAATCC TGTTCATGAA CCCCGGGGGA
CCGGGCGGCA GCGGTTACCT GATGCCGGAG CAGGTGGCCT TGCAGAACCC CTCCGACGCG
CAGCTCAACG ACCAGTACGA CCTGATCGGC TTCGACCCGC GCGGGATCGG CTACAGCACC
TCCGAGGATT GCGCGGGCTT CCTCAACGGT CCGCCGCCGC AGTCCGGGCA GCTGACGAAG
GCGCAGGTGA AGCAGGCGTA CGACGCATCG GCGAAGACCA ACGCCGAGTG CTCCTCGTCG
GACCCCGCGT TCCTGGGGCA GCTCACGACC GCGAACGCGG CGCGGGATCT GGACCAACTG
CGGCGCGCGC TGCACGAGTC GCAGGCGAGC TATTTCGGCG TCTCGTGGGG CACTCAGCTC
GGGGCGGTGT ATCGGAGCAT GTTCCCGGCG ACGATCCATC GGATGTGGCT GGACAGCGTC
GTCTCGCCCC GCGCCTACGA TCTGGCGTAC CGCATGGACG GCGCCGCGCA GAGCGTGGAA
CAGGACTTCG GACTGTTCGC GACATGGCTG GCGCAGCACG ACGACGTCTA CGGCTTGGGC
ACCACCGCTC AGTCGGTGAC CGCGCGAGTG CTGGCCTTGC GCAAGCAGGG CGACGCGCAT
CCCTGGCAGT TCTCTGACCT GAGCGAGCCG CTGGACGGTG GGTTCATAGC GTCCCTCGCG
AGTTCGCAGA ACACTGACTG GGAGCAGGCT GCGGCCGTCC TGAAGAGCAT GACGGCCGCG
GTCTCCGGGC AACCGGCCCC GCCCGGAGTG AAGGCCGTCG CCAACGGCCA CGGCCCGCTC
CCCCCGCCGC CCAGCGGCGC CCCGCAGGCC TTCAACCCGA CGGCGCAGCA GGCCTACCTG
TGCAACGAGG ACGACAGCTC CCGCGCCTTC GAACCGCTCT GGGACGAGTA CCAGCGCAAC
CTCCAGCGCG ACCCGGTCAC CGGCGACCTC ACGGCACTGC GCCCCACCTG CGCGGGATGG
AATCTGCCGG TGCAGCACTT CACGCTGCGC TACAGCCCAG GCTCGCTCCA GATGTCAGGG
CACGAATACG AGACGCTGAC CCCGTACCCG TGGGTGTGGC AGATGCAGCA AGCCATCGGC
GGAACCGTGT TCACCGTCGA CGACTTCCGA CACGGTTCGC TGGCGCTGGT GCCCGAGTGC
GCCTCCCACC TGATCGCGTA CTTCGAGACC GGCAAGGCCG ACTCGGGTTC GTGCCCCGGC
TTGCAGCCCA GCGCGTAG
 
Protein sequence
MKLSKRNGVA ALGLALGVAG VGLSGTASAT PDAASQASAI SAITWQACPQ YSDDVLGAVG 
IQPKDRAAFR DMWARTDCGT VSVPQDYRHP EGQHVTIAFT RLKAKDQAHR QGILFMNPGG
PGGSGYLMPE QVALQNPSDA QLNDQYDLIG FDPRGIGYST SEDCAGFLNG PPPQSGQLTK
AQVKQAYDAS AKTNAECSSS DPAFLGQLTT ANAARDLDQL RRALHESQAS YFGVSWGTQL
GAVYRSMFPA TIHRMWLDSV VSPRAYDLAY RMDGAAQSVE QDFGLFATWL AQHDDVYGLG
TTAQSVTARV LALRKQGDAH PWQFSDLSEP LDGGFIASLA SSQNTDWEQA AAVLKSMTAA
VSGQPAPPGV KAVANGHGPL PPPPSGAPQA FNPTAQQAYL CNEDDSSRAF EPLWDEYQRN
LQRDPVTGDL TALRPTCAGW NLPVQHFTLR YSPGSLQMSG HEYETLTPYP WVWQMQQAIG
GTVFTVDDFR HGSLALVPEC ASHLIAYFET GKADSGSCPG LQPSA