Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0472 |
Symbol | |
ID | 8331799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 534855 |
End bp | 536432 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953638 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003111265 |
Protein GI | 256389701 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.562012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCA GTAAACGCAA CGGCGTCGCC GCTCTCGGGC TCGCCTTGGG CGTTGCCGGC GTCGGTCTGT CCGGCACCGC GAGCGCGACG CCGGACGCCG CGTCGCAGGC TTCTGCGATA TCTGCCATCA CCTGGCAAGC GTGTCCGCAG TATTCCGACG ATGTCCTGGG AGCCGTCGGC ATCCAGCCGA AGGACCGGGC GGCGTTCCGG GACATGTGGG CACGCACCGA CTGCGGGACG GTGAGCGTCC CGCAGGACTA CCGGCATCCG GAGGGACAGC ATGTCACGAT CGCGTTCACC CGGCTGAAAG CCAAGGACCA GGCGCACCGC CAGGGAATCC TGTTCATGAA CCCCGGGGGA CCGGGCGGCA GCGGTTACCT GATGCCGGAG CAGGTGGCCT TGCAGAACCC CTCCGACGCG CAGCTCAACG ACCAGTACGA CCTGATCGGC TTCGACCCGC GCGGGATCGG CTACAGCACC TCCGAGGATT GCGCGGGCTT CCTCAACGGT CCGCCGCCGC AGTCCGGGCA GCTGACGAAG GCGCAGGTGA AGCAGGCGTA CGACGCATCG GCGAAGACCA ACGCCGAGTG CTCCTCGTCG GACCCCGCGT TCCTGGGGCA GCTCACGACC GCGAACGCGG CGCGGGATCT GGACCAACTG CGGCGCGCGC TGCACGAGTC GCAGGCGAGC TATTTCGGCG TCTCGTGGGG CACTCAGCTC GGGGCGGTGT ATCGGAGCAT GTTCCCGGCG ACGATCCATC GGATGTGGCT GGACAGCGTC GTCTCGCCCC GCGCCTACGA TCTGGCGTAC CGCATGGACG GCGCCGCGCA GAGCGTGGAA CAGGACTTCG GACTGTTCGC GACATGGCTG GCGCAGCACG ACGACGTCTA CGGCTTGGGC ACCACCGCTC AGTCGGTGAC CGCGCGAGTG CTGGCCTTGC GCAAGCAGGG CGACGCGCAT CCCTGGCAGT TCTCTGACCT GAGCGAGCCG CTGGACGGTG GGTTCATAGC GTCCCTCGCG AGTTCGCAGA ACACTGACTG GGAGCAGGCT GCGGCCGTCC TGAAGAGCAT GACGGCCGCG GTCTCCGGGC AACCGGCCCC GCCCGGAGTG AAGGCCGTCG CCAACGGCCA CGGCCCGCTC CCCCCGCCGC CCAGCGGCGC CCCGCAGGCC TTCAACCCGA CGGCGCAGCA GGCCTACCTG TGCAACGAGG ACGACAGCTC CCGCGCCTTC GAACCGCTCT GGGACGAGTA CCAGCGCAAC CTCCAGCGCG ACCCGGTCAC CGGCGACCTC ACGGCACTGC GCCCCACCTG CGCGGGATGG AATCTGCCGG TGCAGCACTT CACGCTGCGC TACAGCCCAG GCTCGCTCCA GATGTCAGGG CACGAATACG AGACGCTGAC CCCGTACCCG TGGGTGTGGC AGATGCAGCA AGCCATCGGC GGAACCGTGT TCACCGTCGA CGACTTCCGA CACGGTTCGC TGGCGCTGGT GCCCGAGTGC GCCTCCCACC TGATCGCGTA CTTCGAGACC GGCAAGGCCG ACTCGGGTTC GTGCCCCGGC TTGCAGCCCA GCGCGTAG
|
Protein sequence | MKLSKRNGVA ALGLALGVAG VGLSGTASAT PDAASQASAI SAITWQACPQ YSDDVLGAVG IQPKDRAAFR DMWARTDCGT VSVPQDYRHP EGQHVTIAFT RLKAKDQAHR QGILFMNPGG PGGSGYLMPE QVALQNPSDA QLNDQYDLIG FDPRGIGYST SEDCAGFLNG PPPQSGQLTK AQVKQAYDAS AKTNAECSSS DPAFLGQLTT ANAARDLDQL RRALHESQAS YFGVSWGTQL GAVYRSMFPA TIHRMWLDSV VSPRAYDLAY RMDGAAQSVE QDFGLFATWL AQHDDVYGLG TTAQSVTARV LALRKQGDAH PWQFSDLSEP LDGGFIASLA SSQNTDWEQA AAVLKSMTAA VSGQPAPPGV KAVANGHGPL PPPPSGAPQA FNPTAQQAYL CNEDDSSRAF EPLWDEYQRN LQRDPVTGDL TALRPTCAGW NLPVQHFTLR YSPGSLQMSG HEYETLTPYP WVWQMQQAIG GTVFTVDDFR HGSLALVPEC ASHLIAYFET GKADSGSCPG LQPSA
|
| |