| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0461 |
|---|
| Symbol | |
|---|
| ID | 8331788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 524639 |
|---|
| End bp | 525700 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953627 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003111254 |
|---|
| Protein GI | 256389690 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.686839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCTC GGCGATCGCG GAACGGCGTG GACCTGACCG CGCCGACCAC CGCGAGCACG
ACGACCACCA CCATCGCAGC CGTCGCCGAG GAGGTCGGCG TGTCGGTGGC GACGGTCTCG
AAGGTGCTCA ACGGGCGCTC GGACGTCGCG GCTCAGACGC GGGCCAAGGT CGAGGAAAGC
CTGGAACGGC ACCAGTACCG CCGGCGCGCC AAGAAGAAGC AGACCGGCAC CGGGCAGGTC
GACCTGGTCT TCCACGAGCT CGACTCGGCG TGGGCGATGG AGATCATCCG GGGCGTGGAG
GCGGTGACCG AACCGGACGG GGTCGACGTG GTCCTGTCGC AGTTGGGCGG CGCGCACCAC
CCGCCGCAGC ACTGGCTCGA CGCGGTCTTG GCGCGGCGTC CGCTCGGCGT GCTGTTCGTG
CTGTGCAGCC CGACCAAGGT GCAGCAGGAA CGGTTGCGGC GTCAGGACAT ACCGTTCGTG
GTCGTCGACA CCGACAGCGC CACCACCGCT TCGGTGCCCA CGGTCGGCTC CAACAACTGG
AACGGCGGCT TGGTCGCCAC CCGGCACTTG CTGGAGCTCG GCCATCGCCG GATCGGGATC
ATCTCAGGGC CCAAAGACGT GCTGTGCAGC CGGGCTCGGC TGGCCGGGTT CCGTGCCGCG
CACGAGGAAG CGGACGTCGA GGTCGACCCG GATCTGGTGC GCTACGGCAC GTTCTACCTC
GACGCCGGAT ACGAGCACGG TATGGCGCTG CTGGATCGCC CTGACCGGCC GACGGCGGTG
TTCGCCGGCT CCGACATGCA GGCCTTGGGC GTGCTGCGGG CGGCGCGGCA GCTCGGGATC
GACGTACCGC GCGGGCTGTC GGTGATCGGC TACGACAATC TCGAGGTCGC GGCCTGGACC
GATCCGGCGT TGACCACGAT CGACCAGCCG ATAAGGGATA TGGCTGGGAC CGCCACGCGC
ATGGTTCTGG ATCTGGCTCA CGGCCAGGAC CCGAGCAGCA GCCGGATCGA CTTGGTCACC
GCGCTAGTGG TGCGGGAGAG CACTGCGCCG CCGGCGGGCT GA
|
|---|
| Protein sequence | MAPRRSRNGV DLTAPTTAST TTTTIAAVAE EVGVSVATVS KVLNGRSDVA AQTRAKVEES
LERHQYRRRA KKKQTGTGQV DLVFHELDSA WAMEIIRGVE AVTEPDGVDV VLSQLGGAHH
PPQHWLDAVL ARRPLGVLFV LCSPTKVQQE RLRRQDIPFV VVDTDSATTA SVPTVGSNNW
NGGLVATRHL LELGHRRIGI ISGPKDVLCS RARLAGFRAA HEEADVEVDP DLVRYGTFYL
DAGYEHGMAL LDRPDRPTAV FAGSDMQALG VLRAARQLGI DVPRGLSVIG YDNLEVAAWT
DPALTTIDQP IRDMAGTATR MVLDLAHGQD PSSSRIDLVT ALVVRESTAP PAG
|
|---|
| |