| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0431 |
|---|
| Symbol | |
|---|
| ID | 8331758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 479655 |
|---|
| End bp | 480716 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953597 |
|---|
| Product | Carbohydrate-binding family V/XII |
|---|
| Protein accession | YP_003111224 |
|---|
| Protein GI | 256389660 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3584] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.661392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT TCCCCATCAG GCGACGAATA CCCGAGCACG CCCCGAGCCG CCGGCCCGGC
CCTCGTCTGC GAGCACTGTT GGGCGCTGTG GCCCTGACGC TCACAGCCTT CGGCGCGGTC
GGAGTCGTGG CCGCTCAGCA AGCCAGCGCC GCGGGTACCT CCTCGCTGCC GACCTGCCCG
TTCTGGACCA ACGTCACCCC GCCGCCGCGG ACCGACACCC CGTGGGTGCC GCCGCTACAG
ACCGCTCAGC CGGTCAACTT CTCCTCGCGG CTGGCCGCCC CCGGCGGCGT CACCGGCACT
TTGACCGGCA GCCAGGTCGA CATCTCGTTC AACCGCGTCG CCGGCGCGCA GGCCTACCGG
GTCTGGCGCA ACGGCCAGGC CATCGCATGG GTCTCCGACT GGGGGCAGCC GGCCCTCACC
GCGGTCGACA ACGCGCCATG TCAGAACGCT TACTACACCT TCGAGGCGAT GAGCGACCAA
AGCGGCGCCG ACTCCTCGCT GGGCCAGATG TCCTCGCCCT ACCAGCTGAA CTCCGACGGC
GCGGTGGTGC CGTGGCAGAT CCCGGTCGGC AGCACCGTCA CCATGATGGT CACCTCCTAC
AACGACGGAG GGATGACGGC GTCCGGCTAC AACTCGCAGC TCGGAGTGTG CGCGGTCGAT
CCGCGGGTGA TCCCGTGGGG CACGTACTTC ACCGTGCCGG GCTACGGGAC CTGCTACGCC
GCCGACATCG GGACGTGGAT CCAGAACGAC ACCGTCGACG TCTGGTTGCC GGGCTCGCAG
GCGAACGGTT GGGGCGTGCA GCATCGCACG GTCACGATCA TCGCCAACCC GTTCGGCGGA
CCGACGCCGC CGCCAAGCAG TTCTCCGTCC AGCTCGCCGA CGTCCTCGCC GAGCTCGCCT
CCCGGCGGCT GTACCACTGC GGCCTGGAAC TCCGCGACGG CCTACACCGG CGGCCAGACC
GTCAGCTATG GCGGCCACAC CTGGACGGCC AAGTGGTGGA CCCAGGGTGA CGTCCCCGGC
GCCAACTCCC AGAACGTCTG GACGGACGAC GGACCATGCT GA
|
|---|
| Protein sequence | MSLFPIRRRI PEHAPSRRPG PRLRALLGAV ALTLTAFGAV GVVAAQQASA AGTSSLPTCP
FWTNVTPPPR TDTPWVPPLQ TAQPVNFSSR LAAPGGVTGT LTGSQVDISF NRVAGAQAYR
VWRNGQAIAW VSDWGQPALT AVDNAPCQNA YYTFEAMSDQ SGADSSLGQM SSPYQLNSDG
AVVPWQIPVG STVTMMVTSY NDGGMTASGY NSQLGVCAVD PRVIPWGTYF TVPGYGTCYA
ADIGTWIQND TVDVWLPGSQ ANGWGVQHRT VTIIANPFGG PTPPPSSSPS SSPTSSPSSP
PGGCTTAAWN SATAYTGGQT VSYGGHTWTA KWWTQGDVPG ANSQNVWTDD GPC
|
|---|
| |