Gene Caci_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0425 
Symbol 
ID8331752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp475544 
End bp476416 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID644953591 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003111218 
Protein GI256389654 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.205565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.663095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTC TTCGCCTTGC AGACGGCCGG AATCTCGAAT ACCTGGTAGC CGGGCCCGAT 
GGCGGGACGC CGCTCGTCTT TCATCACGGC ACGCCGTTCG CGGCGGTGCT GTTCGAGCCG
ATGGTTGAGG CGGCGACGCG GCACGGGTTG CGCTTCGTCG TTCACAGCCG CCCTGGGTAC
GCCGACTCCT CGCCGCAGCC GGGCCGCACC ATCGCCTCGG TGGCCGAGGA CGTCGCGGCG
TTGCTGGCGG CGCTGGACGC CGAGCGCTTC CTGACCGTCG GCTGGTCCGG GGGCGGTCCG
CATGCCTTGG CCTGCGCGGC GCTGCTGCCG GAGCGGTGTG TGGCGGCGGC GACCGTGGCC
GGTGTCGCGC CGTACCGTGC CGAGGGTCTG GACTGGCTGG ACGGGATGGG TGCGGAGAAC
ATCGAGGAGT TCGCGGCGGC GGTGTCCGGT GCTGCGCCGT TGACCGAATT CCTGAGTGCG
CAGGCGGCTG GGCTTGCGAA CGTGCAGGGC GCGGACATCG CCGCGGCGCT GGGTGAACTG
ATCTCCGAGG TCGACGGCAG GGCGCTGAGC GACGCGTTCG CCGATTTCAC GGCGGCGGCG
TTCCGGAAGG CGGTGTCCGC CGGCATCGAC GGCTGGCACG AGGACGACCT GGCGTTCATC
GGCGACTGGG GTTTCGACCT CGCCGCGATC AAGACGCCGG TCTCGGTCTG GCAGGGGGAC
GAGGACCGCA TGGTCCCGTT CGCGCACGGC CGCTGGCTCG CCGGCGCGCT GCCCGGCGCC
GCCGCACAGC TGCTGCCGAA CGAGGGACAC CTGTCGCTCG TGCTCGACCG GTTCGACGAC
GTCGTCGCCG ACCTCGTCAA GAGGCTGCCC TGA
 
Protein sequence
MTSLRLADGR NLEYLVAGPD GGTPLVFHHG TPFAAVLFEP MVEAATRHGL RFVVHSRPGY 
ADSSPQPGRT IASVAEDVAA LLAALDAERF LTVGWSGGGP HALACAALLP ERCVAAATVA
GVAPYRAEGL DWLDGMGAEN IEEFAAAVSG AAPLTEFLSA QAAGLANVQG ADIAAALGEL
ISEVDGRALS DAFADFTAAA FRKAVSAGID GWHEDDLAFI GDWGFDLAAI KTPVSVWQGD
EDRMVPFAHG RWLAGALPGA AAQLLPNEGH LSLVLDRFDD VVADLVKRLP