Gene Caci_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0414 
Symbol 
ID8331741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp461750 
End bp462451 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID644953580 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003111207 
Protein GI256389643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG AACCCGCCGA ACCTGCCGAA CCCGCCGAAC CCGCCCCGCG CAAAACCCCC 
ATCACCCTCG AGCGCATCAC CGACGCCGCA CTCCAGGTCG TGGCGACCGA GGGCTACGAC
GCGCTGACCA TCCGCCGCGT CACGAACGTC CTGGGCACCG GACCCTCATC CCTGTACGCC
CACATCGCCA CCAAGACAGA CATCGACGAC CTCCTCATCG GCCGCCTCTG CTCCGAGATC
ACCCTCCCCG ACCCCGACCC CGCCACCTGG CAGCACCAAC TCCGCGACGT CTACGCCCAA
CTCCGCGACC AGTACCTGAA GTACCCCGGC ATCTCCAAAG CCGCCCTGGC CACCGTCTCC
GCCAACCCCG AAACCCTCCG CGTCAGCGAA GGCATCTTCG CCATCCTCCT GTCCGCCGGC
ATCGACCCCC AGACCGCCGC CTGGACCATG GACGCCATCA CCCTCTACGT AGCCGCCTAC
GCCCTCGAAC TCTCCCTGGT CCACCACCGC CGAAAAGACC CCACCACCCC CTGGCTCCTC
AGCCACGAAG CCCTCACCGC CCACCTCACC TCCCTTCCCG AAGCCACCTT CCCCCAGACC
CGCCGCCACG CCGCCGCCCT GACCTCCGGC ACCGGCCACC AGCGCTTCGA CTTCGCCCTC
ACGCTGCTGA TCGATAACTT GACGAGTCAG ACGAAGTCGT AG
 
Protein sequence
MAAEPAEPAE PAEPAPRKTP ITLERITDAA LQVVATEGYD ALTIRRVTNV LGTGPSSLYA 
HIATKTDIDD LLIGRLCSEI TLPDPDPATW QHQLRDVYAQ LRDQYLKYPG ISKAALATVS
ANPETLRVSE GIFAILLSAG IDPQTAAWTM DAITLYVAAY ALELSLVHHR RKDPTTPWLL
SHEALTAHLT SLPEATFPQT RRHAAALTSG TGHQRFDFAL TLLIDNLTSQ TKS