Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0414 |
Symbol | |
ID | 8331741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 461750 |
End bp | 462451 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953580 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003111207 |
Protein GI | 256389643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCG AACCCGCCGA ACCTGCCGAA CCCGCCGAAC CCGCCCCGCG CAAAACCCCC ATCACCCTCG AGCGCATCAC CGACGCCGCA CTCCAGGTCG TGGCGACCGA GGGCTACGAC GCGCTGACCA TCCGCCGCGT CACGAACGTC CTGGGCACCG GACCCTCATC CCTGTACGCC CACATCGCCA CCAAGACAGA CATCGACGAC CTCCTCATCG GCCGCCTCTG CTCCGAGATC ACCCTCCCCG ACCCCGACCC CGCCACCTGG CAGCACCAAC TCCGCGACGT CTACGCCCAA CTCCGCGACC AGTACCTGAA GTACCCCGGC ATCTCCAAAG CCGCCCTGGC CACCGTCTCC GCCAACCCCG AAACCCTCCG CGTCAGCGAA GGCATCTTCG CCATCCTCCT GTCCGCCGGC ATCGACCCCC AGACCGCCGC CTGGACCATG GACGCCATCA CCCTCTACGT AGCCGCCTAC GCCCTCGAAC TCTCCCTGGT CCACCACCGC CGAAAAGACC CCACCACCCC CTGGCTCCTC AGCCACGAAG CCCTCACCGC CCACCTCACC TCCCTTCCCG AAGCCACCTT CCCCCAGACC CGCCGCCACG CCGCCGCCCT GACCTCCGGC ACCGGCCACC AGCGCTTCGA CTTCGCCCTC ACGCTGCTGA TCGATAACTT GACGAGTCAG ACGAAGTCGT AG
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Protein sequence | MAAEPAEPAE PAEPAPRKTP ITLERITDAA LQVVATEGYD ALTIRRVTNV LGTGPSSLYA HIATKTDIDD LLIGRLCSEI TLPDPDPATW QHQLRDVYAQ LRDQYLKYPG ISKAALATVS ANPETLRVSE GIFAILLSAG IDPQTAAWTM DAITLYVAAY ALELSLVHHR RKDPTTPWLL SHEALTAHLT SLPEATFPQT RRHAAALTSG TGHQRFDFAL TLLIDNLTSQ TKS
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