Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0403 |
Symbol | |
ID | 8331730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 449980 |
End bp | 450621 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953569 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003111196 |
Protein GI | 256389632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.472446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.522596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCTCGA CTTTATCCAC GGACGACCGT GAAGTCGAGG GCACCCTCGA TTTCGTTAGA CTGACAGACA TGGCACCGGC CCGAACCCTC CGCGCGGACG CGGCGCGCAA CCGTGAGAAG CTGCTGTCCG CGGCCACGCG GCTGTTCGCC GAACGCGGGC TGGACGTGCC GATGGAACAC ATCGCGCGTA CCGCCGGAGT CAGCATCGGC ACGCTGTACG CGCACTTCCC GACGCGCGTC GCGCTCTTCG AGGCGATCTT CCCGACACGG CTGGCGGCGC TCCAGGAACT CGGCCGCAAG GCACTGGCCG AACCCGACGC CTGGCAGGCC TTCGTCGGCT ATCTCCAGGA CGTGTTCGCG ATGCACGCCG AGGACCACGG CCTGAACGAG GTGCTGGCCC GCGACATCCC CGACGCCGCC GGTGTCGTGC AGTCATGCCG GCAGGGCGCG GGGCACGCCG CCGAGCTGAT CGACCGCGCC CACGCCGACG GCCGACTGCG CGCCGACTTC ACGATCACCG ACATGTCCAC ACTGACGCGC GCGATGACAC GGGTCATCCG GGACTCGATC AACGGCGGCA CGGACGAGTG GCGCCGATTC TTGGGGATTT ACATCGACGG GCTGCGCGCC GAGAACCCAT GA
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Protein sequence | MPSTLSTDDR EVEGTLDFVR LTDMAPARTL RADAARNREK LLSAATRLFA ERGLDVPMEH IARTAGVSIG TLYAHFPTRV ALFEAIFPTR LAALQELGRK ALAEPDAWQA FVGYLQDVFA MHAEDHGLNE VLARDIPDAA GVVQSCRQGA GHAAELIDRA HADGRLRADF TITDMSTLTR AMTRVIRDSI NGGTDEWRRF LGIYIDGLRA ENP
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