Gene Caci_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0395 
Symbol 
ID8331722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp441225 
End bp441893 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID644953561 
Producthypothetical protein 
Protein accessionYP_003111188 
Protein GI256389624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0714625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGT TCGAGACCCC GAGCCCGGTC ACCGTCGTCC TGGACATCCC GGCGGGCCAG 
ATCCGGCTGG TCGCCGGGGA GCGGGCCGAC ACCGTCGTGG AGGTGCTGCC GTCGGAGGCT
TCGAAGCGGC GGGACGCCAA GGCTGCGGCG CAGACCACCG TGGAGTTCAG CGGCGGGGTG
CTGCGGATCG CGACCGCCGA CCCGCACAAG ATCCTGGGCA GCTCCGGGTC GCTGGACGTG
ACCATCGCGC TGCCGGCCGG CTCGCGGATC GAGGGCAAGG CCGGCGCCGC GGAACTGCAC
AGCACCGGGC GGCTCGGCGA GGTGGCGTTC GACGGCGGGT ACCGCTCGGT CGAGCTGGAC
GAGGTCGCCG GCGCGCGCAT CAAGATGCAC ATGGGGGACG TCTCCATCGC CAAGCTGACC
GGTCCGGCGC AGCTGCGCAA CGGCAAGGGC GACATCACCG TCGCCGAGGC CGCCGGCGGC
GCGGTGGACC TGCGCACCGA CATGGGCGAC CTGAAGATCG CCGCCGCCCC CGGCGTCTCC
GGGACCCTGG ACGCCAGCAG CGCCTCCGGC CGCATCACCA ACGCGCTGAA GAACTCCGAA
GGCGCCGGCG CCGGCCTGAA CATCAAGGCC ACCACCTCGC ACGGCGACAT CATCGCCACC
AGCCTGTGA
 
Protein sequence
MQKFETPSPV TVVLDIPAGQ IRLVAGERAD TVVEVLPSEA SKRRDAKAAA QTTVEFSGGV 
LRIATADPHK ILGSSGSLDV TIALPAGSRI EGKAGAAELH STGRLGEVAF DGGYRSVELD
EVAGARIKMH MGDVSIAKLT GPAQLRNGKG DITVAEAAGG AVDLRTDMGD LKIAAAPGVS
GTLDASSASG RITNALKNSE GAGAGLNIKA TTSHGDIIAT SL