Gene Caci_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0392 
Symbol 
ID8331719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp437531 
End bp438940 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content70% 
IMG OID644953558 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003111185 
Protein GI256389621 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.497011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCAGG GTTGGTCAGC GGGGTTCGAA GTGCCGTACG ACCCCGACTG GGTCGTGCCG 
CGGCGGGACT GGCGGCACAG CCTGCCCCTG CTGCCGCGCC GGCCGTTGTC GGCCGTGTTG
TTGGCCGTGC TCGCGGCGGG GATCGCGGGC CTGTTGGCGT TGTGGTGGCA GGAGACGCCC
GCCGACCGGA TGCAGTCGCT GCCCGACTAC CTGGTGATGC TGGCGCAGAT CACCGGGCTG
GTCGGCGCCT ACCTGCTGCT GGTCGAGATC GCGCTCATGG CCCGCTTGCC CTGGCTGGAG
CACCGGCTGG GCTCGTGGCT GGCCTCGGCG CACCGCAGCC TCGGCGGCTA TCTGGTGCTG
CTGCTGTGCG CGCACGTCGG GTTCGTGATC GCGGCGTACT CGGTCAGCGT GCACGACTCG
CCGCCGGCCG TTCTCGTCAG CATCCTGCGA ACCTATCCCG GGGTCCTCGC CGCGACGATC
GGGTTCCTGG TGATGCTGCT CGCGGGGTTC ACGTCGGCCC GGAGCATCCG CCGGCGGCTG
GGATACGAGG GGTGGCACGC GATCCACCTG CTGATGTATC CGGCGGCGGC CGCCGCGTTC
TGGCACCAGA TCACCCTCGG CGCGCAGTTC ACGCGGAACC CGTGGGCGGC GGACGTGTGG
GTCGGGCTGC ACGCGGTCGT CGGGGCGGCG ATCGTCTGCA ACCGCATAGT GATCCCGCTC
CTGAACAACC GGCACCACCG GTTCCGCGTG AGCCGGGTCG AGGCGGTCGG GCCGGATGCG
ATGAACGTCT ACATCACCGG ACGGCGGGTC GCGGACCTCG GCGCGGAGGC CGGGCAGTAC
TTTCGGTGGC GGTTCATGCA ACGGAGCCTG TGGTACCAGG CGCATCCGTT CTCCTTGTCC
GCCGCGCCGC ACGCGGACAC GCTGCGCCTG ACGTTCAAGT GCGTCGGCGG ATACACCCGA
CGGCTCAAGC GGCGGCTGCG ACCGGGGAGC AGGGTGTTCC TGGACGGTCC CTACGGCGCG
TTCACCGGCG TGCTGCGCCG CCAGCCCGGC GTGGTGATGA TCGGCGGCGG CATCGGCGTC
ACCCCGCTGC GGGCGATCGT GGAGACGATG CACAACCGGC GGCGGAACGA CATCATCTTC
ATCCAGCGCG CCTCGAAGGT CGGCGACCTG ATCCTCACCA ACGAACTCGA AGCGCTCAAC
GCCGTCGGGC GCATCATCTA CATCCCGGCG ATCGGCAGCC GCAGGAACGA CCCGCTGTCC
GCCGACCGGC TCCTGGACCT GATCCCCGAC CTGGAGTTCC GCGAGGTCTT CATCTGCGGC
TCGGTCGGCA TGGCCGCCGC CGCGGTGCGG AACCTGCGCC GAGCCGGGGT CCGCCGGGGA
CGCATCCATA CCGAGATCTT CGACTTCTGA
 
Protein sequence
MVQGWSAGFE VPYDPDWVVP RRDWRHSLPL LPRRPLSAVL LAVLAAGIAG LLALWWQETP 
ADRMQSLPDY LVMLAQITGL VGAYLLLVEI ALMARLPWLE HRLGSWLASA HRSLGGYLVL
LLCAHVGFVI AAYSVSVHDS PPAVLVSILR TYPGVLAATI GFLVMLLAGF TSARSIRRRL
GYEGWHAIHL LMYPAAAAAF WHQITLGAQF TRNPWAADVW VGLHAVVGAA IVCNRIVIPL
LNNRHHRFRV SRVEAVGPDA MNVYITGRRV ADLGAEAGQY FRWRFMQRSL WYQAHPFSLS
AAPHADTLRL TFKCVGGYTR RLKRRLRPGS RVFLDGPYGA FTGVLRRQPG VVMIGGGIGV
TPLRAIVETM HNRRRNDIIF IQRASKVGDL ILTNELEALN AVGRIIYIPA IGSRRNDPLS
ADRLLDLIPD LEFREVFICG SVGMAAAAVR NLRRAGVRRG RIHTEIFDF