Gene Caci_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0367 
Symbol 
ID8331694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp410886 
End bp411854 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content73% 
IMG OID644953534 
Productputative GAF sensor protein 
Protein accessionYP_003111161 
Protein GI256389597 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC GCGACGACTT CCAGACCCCG GCCCTGCGGC TGGGGCAGCC GGCGCCCTCG 
GACGCCGCCG CGCGCGCGGC GCGCCAGCGG GAGCTGAGCC TGTCCGCCAC GGCGGACTCG
GTCTTCGACG AGGTCGCGCG CCGGGCCGCC GAGGCCACCG GCGCCACCGC GGCGATGGTC
AACATGGTCG GCGAGAACGG CCAGTACCTG GTGGGGCTGT ACGGCAAGGA GCCGGGCAGC
GGCGAGGCGG CGTTCCTGGG CGACCCCGGC CGCTACGCGG CCATGGACCA GGGCTTCTGC
GTGCACGTCG TGGGCCGCAA GGCCGCGCTG ACCCTGGACG ACGTCTTCGA CTTCTCCCGG
TTCCGCGGCA ACCCGATCGT CGACGAGCTC GGGGTCCGCA GCTACATCGG CGTGCCGCTG
ATCGACGACG GCGGCACGGT GATCGGCACG GTGTGCGCGA TCGACCCGGC GCCGCGCAGC
GAATCCGACG GCAACTCCTG GGGGAATCAG GGCCTTCAGG TCCTCAAGGC CGCGCGCGAC
GAGGTCCTGG CCGAGATCAG CGGTCGGCAG AAGATCGCCG CCATCCTGGA GAACGCCGGC
GGCACGGCGA TGATCGCGGC GCGTCCGGGA CTGGAGGTGC TGTACGCGAA CACGCTGCAC
GATCAGCTCT TCGGCGCCGT CCAGGTACTC GGCACACCCG CCCTCGAGGC CTTCCCGCAC
CTGGCGCCGG TCGGCATCCT GGCCGTCATC GAGACCCTCG ACCGCGGCGG CGAGCCGACG
ACCACCGCGC CGATCCCGCT GAGCGAGCCC GCCACCGGCT CGGTGATCTT CGCCGCGGTC
CCGGTCCGGG TACCCGGCCA CGCCTCGGCG GTGCTCACCC TCGGGCTGCG GGACAGCGAC
GCGGCGACCG TGCTGAACCG GGCCGCGCAG ATCGCCGCGG ACATCGGGGC GCTCAGCGAC
ACCAGGTGA
 
Protein sequence
MTDRDDFQTP ALRLGQPAPS DAAARAARQR ELSLSATADS VFDEVARRAA EATGATAAMV 
NMVGENGQYL VGLYGKEPGS GEAAFLGDPG RYAAMDQGFC VHVVGRKAAL TLDDVFDFSR
FRGNPIVDEL GVRSYIGVPL IDDGGTVIGT VCAIDPAPRS ESDGNSWGNQ GLQVLKAARD
EVLAEISGRQ KIAAILENAG GTAMIAARPG LEVLYANTLH DQLFGAVQVL GTPALEAFPH
LAPVGILAVI ETLDRGGEPT TTAPIPLSEP ATGSVIFAAV PVRVPGHASA VLTLGLRDSD
AATVLNRAAQ IAADIGALSD TR